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Report for CCDS52981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52981.1 Public Mus musculus X Ezhip 23 108 98 CCDS HistoryNCBI Gene:102991Re-query CCDS DB by CCDS ID:52981.1Re-query CCDS DB by GeneID:102991See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52981.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000117544.1 ENSMUSP00000114041.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117544.1Link to Ensembl Protein Viewer:ENSMUSP00000114041.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117544Re-query CCDS DB by Protein ID:ENSMUSP00000114041
Original member Current member NCBI NM_001166433.1 NP_001159905.1 Accepted alive Link to Nucleotide Sequence:NM_001166433.1Link to Protein Sequence:NP_001159905.1Re-query CCDS DB by Nucleotide ID:NM_001166433Re-query CCDS DB by Protein ID:NP_001159905Link to BLAST:NP_001159905.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159905.1 589 B1B0V2-1 589 100% 0 0

Chromosomal Locations for CCDS 52981.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 6081553 6083322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGGCCAGCTCTTCGTCTCCAGAGAGGGGGCTGGAGGCGCTCAGAGACACTGACGAGTCCGAAGGTGAAG
CTCCGGGGCCTTCGGGGCCCAGAGGCCGAGGTGGTCCCTCGGGGGCAGGCAGCGCGCTGCGTCTCCGGAG
CCTCGAAGCCGAAATGGCGGCGGCCTGCGTCACCTCCACGGCCGGTGAGGACCTGGGGACATTTTCTGAG
CCTGGGAGTCAACATGGCGACCCTGAGGGTGGCGGTGGCCCAGACCTAGAACTTGGACATGCAAGGCCCA
TGATGAGAAGCCAGAGAGAGCTCGGCCTGACCCCGAAAGGCGGCGGGAAAGCCGACCAAGGCGGGAAAGG
CAGGAAAGGCGGCAGCGGCTCCCCGCCTCACACCAAGAGCAGTAGAAAGAGGGAGCAGCCCAACCCCAAC
CGGAGCCTAATGGCCCAAGGTGCAGCCGGGCCTCCGCTTCCCGGAGCTCGAGGGTCTCCTGCTATGCCCC
AGCCAGAGTCTTCTCTGAGCCCTAGGCCTGACCAAAGCCACCATTTTGATTTTCCAGTGGGGAACCTAGA
AGCCCCGGGGCCTACCCTCAGGAGCTCCACCTCACAGGGCTCGGGGTCTACTCCAGTCCCCGAGGCCCTC
CGCTGTGCCGAGTCCAGCCGTGCCGAGAGTGACCAGTCCAGCCCTGCTGGCCGAGAACTGCGTCAACAGG
CCAGTCCACGGGCTCCCGATGATGATGATGACGGTGATGGTGGTCCTGATCCCAGAGGCAGCGGGACCCC
CGAAGGCTGGGTCCTCCGTTCCGGAGTTGTACCTTTCGGTCGTAGGAGCAGTGCATCGGAGGTCAGCCCC
GAAGAGGTTCGCCCCGAAGCCCAGTGCACAGGCTGGAATTTACGTCCTCGTCCTCGGAGCAGTGCATCAG
CGGTCAGCCCTGAAGCTCGCCCCAAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTCGTCCTCGGAGCAG
TGCATCAGTGGTCAGCCCTGAAGCTCGCCCCAAAGCCCAGAGCGCAGGCAGGAATTTACGTCCTCGTCCT
CGGAGCAGTGCATCAGTGGTCAGCCCCGAAGCTCGCCCGGAAGCCCAGAGCGCAGGCAGGAATTTACGTC
CTCGGGCCACTCCACGAGTTCCTGTTGCTCCCAGCAGTACCACGAGGTCCAGTTCTGATAGAGGCAGCAG
CCGTGCCCCACGGAGCCGGAGCCGAAGCCGCAGCTGCAGTACACCCAGGCTCGGCTCTGACCATCAACGG
AGCCGTAAAATAAAGATGAGGCTGGATCTGCAAGTGGACCGTGAGCCGGAATCGGAGGCAGAGCAAGAAG
AGCAAGAGCTGGAGTCAGAACCTGGCCCTAGCAGCCGGCCGCAAGCGAGCCGTTCCTCCTCTAGGTTTGC
AGTCCCAGGGAGATCCTCTCTAGCAGCCGAAGACTCTCCTCCAAGGCGCCCAGTTCGTATGCGAGCCTCT
TCCCCTTCTCCTCCTGGTAGGCTCTATCCTTTGCCCAAGCACTATTTTGAAGGTGTCCATTCTCCCTCCT
CATCTTCCAGTGAGTCCTCCAGTGTTTCAAGTTCCCATTCTCCCCTCAATAAGGCACCAGATCCAGGCTC
CTCACCTCCATTAAGCTCTCTCTCTGGTCCTAATCCCTTTTGGCTTGCCTTGATAGCTGACCTGGATAAC
CTTGATTCTTCCTCTCCCAGAGTGCCAGGGGAAGAAATAGAGGCAGCCCCTCACACTCGTGAAGAGGAAG
ATAAGAAGTGTAGGGGATGA

Translation (589 aa):
MASSSSPERGLEALRDTDESEGEAPGPSGPRGRGGPSGAGSALRLRSLEAEMAAACVTSTAGEDLGTFSE
PGSQHGDPEGGGGPDLELGHARPMMRSQRELGLTPKGGGKADQGGKGRKGGSGSPPHTKSSRKREQPNPN
RSLMAQGAAGPPLPGARGSPAMPQPESSLSPRPDQSHHFDFPVGNLEAPGPTLRSSTSQGSGSTPVPEAL
RCAESSRAESDQSSPAGRELRQQASPRAPDDDDDGDGGPDPRGSGTPEGWVLRSGVVPFGRRSSASEVSP
EEVRPEAQCTGWNLRPRPRSSASAVSPEARPKAQSAGRNLRPRPRSSASVVSPEARPKAQSAGRNLRPRP
RSSASVVSPEARPEAQSAGRNLRPRATPRVPVAPSSTTRSSSDRGSSRAPRSRSRSRSCSTPRLGSDHQR
SRKIKMRLDLQVDREPESEAEQEEQELESEPGPSSRPQASRSSSRFAVPGRSSLAAEDSPPRRPVRMRAS
SPSPPGRLYPLPKHYFEGVHSPSSSSSESSSVSSSHSPLNKAPDPGSSPPLSSLSGPNPFWLALIADLDN
LDSSSPRVPGEEIEAAPHTREEEDKKCRG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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