NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS53882.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53882.1 Public Homo sapiens 14 KLHL33 24 110 108 CCDS HistoryNCBI Gene:123103Re-query CCDS DB by CCDS ID:53882.1Re-query CCDS DB by GeneID:123103See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53882.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344581.4 ENSP00000341549.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344581.4Link to Ensembl Protein Viewer:ENSP00000341549.4Re-query CCDS DB by Nucleotide ID:ENST00000344581Re-query CCDS DB by Protein ID:ENSP00000341549
Original member Current member NCBI NM_001109997.3 NP_001103467.2 Accepted alive Link to Nucleotide Sequence:NM_001109997.3Link to Protein Sequence:NP_001103467.2Re-query CCDS DB by Nucleotide ID:NM_001109997Re-query CCDS DB by Protein ID:NP_001103467Link to BLAST:NP_001103467.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001103467.2 533 A6NCF5 533 100% 0 0

Chromosomal Locations for CCDS 53882.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20428849 20429401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20429502 20429669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20429795 20430675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGCTCCTGAGCGGGATGAGGGAATCCCAGGGCACAGAGGTATCTCTGCGGACGATCTCCACCCAGGACC
TGCGACTCCTCGTCTCTTTTGCTTACTCCGGAGTTGTGCGGGCAAGGTGGCCAGGGCTACTGAGAGCTGC
CCAGGCTGCTCTGCAGTACCAGAGCTCTTCCTGCTTGGATTTGTGTCAGAAAGGCTTGGCACGGGGCCTC
AGCCCTGCCCGTTGCCTGGCCCTGTTCCCCATGGCGGAAGCCCCTGGGTTGGAGAGGCTCTGGAGCAAAG
CCCGTCACTACCTCCTCACCCACCTGCCTGCTGTAGCCTTGTGTCCTGCTTTCCCTTCTTTACCAGCTGC
CTGCTTGGCTGAGCTCCTGGATAGTGATGAGCTCCATGTGCAGGAGGAGTTTGAGGCCTTTGTGGCTGCA
CGGTGTTGGCTGGCTGCCAACCCCGAGACCCAGGAGTCAGAGGCCAAGGCCCTGCTGCGATGTGTCCGCT
TTGGCCGCATGTCCACCAGGGAGTTGCGGAGGGTGCGGGCAGCCGGGCTACTTCCACCCCTGACCCCAGA
TCTGTTGCACCAGCTGATGGTAGAGGCTGATGTTCCAGGCCAAGAGAGACGGAGGGAGCCTGACCGGGCA
CTGGTAGTGATTGGCGGGGATGGGCTCAGACCAGACATGGCCCTAAGACAACCATCCCGAGCAGTGTGGT
GGGCCCGGGCCTTCCGCTGTGGCGTGGGACTGGTACGAACTGTTGAGTGGGGGCAGCTGCCTGCCCTGCC
TGCCCCCGGACGCTTCCGGCATGGGGCTGCAAGCCTGGCAGGAAGTGAACTCTATGTGTGTGGGGGACAA
GATTTCTACAGTCACTCCAACACCCTGGCTTCAACTCTCAGGTGGGAGCCCAGTCAAGAGGACTGGGAGG
AGATGGCTCCTTTGTCCCAGGCTCGAAGCCTTTTCTCCTTGGTGGCACTGGATGGAAAACTTTATGCCCT
GGGTGGAAGACACAATGATGTTGCCCTGGACTCTGTGGAGACCTACAACCCTGAGCTCAATGTCTGGAGG
CCAGCACCTGCACTTCCAGCACCATGTTTTGCCCACGCAGCTGCGATTTTGGAGGGCCAGTTGTACGTGA
GCGGTGGCTGTGGTGGGACTGGCCAATACCTGGCCTCACTGATGCACTATGACCCCAAACTTGAGAAGCC
AGGGACGTTTCTGAGCCCTATGGGGGTACCTCGGGCTGGCCATGTCATGGCTGCATTGGGTGGGAGGTTG
TATGTGGCAGGTGGGCTGGGTGAGACTGAGGACCTGCTAAGCTTTGAGGCCTATGAACTAAGGACTGATA
GCTGGACTCACCTGGCACCCCTACCCTCCCCCCATGTGGGGGCTGCAAGTGCTGTGCTGCAGGGGGAGCT
ACTGGTGCTCGGGGGCTACAGTCACCGTACTTATGCCCTCTCTCACCTTATCCATGCCTACTGTCCTGGC
CTGGGCCGATGGCTCTGCCTGGGAACTCTGCCAAGGCCTCGGGCTGAGATGCCTGCCTGCATCCTGACAC
TGCCCGCTGTGCAGCACATAGCTTTGGTTCCCACCCCACACCAAACCAAACCTGCTGGGTGA

Translation (533 aa):
MLLSGMRESQGTEVSLRTISTQDLRLLVSFAYSGVVRARWPGLLRAAQAALQYQSSSCLDLCQKGLARGL
SPARCLALFPMAEAPGLERLWSKARHYLLTHLPAVALCPAFPSLPAACLAELLDSDELHVQEEFEAFVAA
RCWLAANPETQESEAKALLRCVRFGRMSTRELRRVRAAGLLPPLTPDLLHQLMVEADVPGQERRREPDRA
LVVIGGDGLRPDMALRQPSRAVWWARAFRCGVGLVRTVEWGQLPALPAPGRFRHGAASLAGSELYVCGGQ
DFYSHSNTLASTLRWEPSQEDWEEMAPLSQARSLFSLVALDGKLYALGGRHNDVALDSVETYNPELNVWR
PAPALPAPCFAHAAAILEGQLYVSGGCGGTGQYLASLMHYDPKLEKPGTFLSPMGVPRAGHVMAALGGRL
YVAGGLGETEDLLSFEAYELRTDSWTHLAPLPSPHVGAASAVLQGELLVLGGYSHRTYALSHLIHAYCPG
LGRWLCLGTLPRPRAEMPACILTLPAVQHIALVPTPHQTKPAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH