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Report for CCDS31103.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31103.1 Public Homo sapiens 1 OR2L2 24 110 108 CCDS HistoryNCBI Gene:26246Re-query CCDS DB by CCDS ID:31103.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31103.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366479.4 ENSP00000355435.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366479.4Link to Ensembl Protein Viewer:ENSP00000355435.2Re-query CCDS DB by Nucleotide ID:ENST00000366479Re-query CCDS DB by Protein ID:ENSP00000355435
Original member Current member EBI ENST00000642011.1 ENSP00000493154.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642011.1Link to Ensembl Protein Viewer:ENSP00000493154.1Re-query CCDS DB by Nucleotide ID:ENST00000642011Re-query CCDS DB by Protein ID:ENSP00000493154
Original member Current member EBI ENST00000641771.1 ENSP00000493410.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641771.1Link to Ensembl Protein Viewer:ENSP00000493410.1Re-query CCDS DB by Nucleotide ID:ENST00000641771Re-query CCDS DB by Protein ID:ENSP00000493410
Original member Current member NCBI NM_001004686.3 NP_001004686.1 Accepted alive Link to Nucleotide Sequence:NM_001004686.3Link to Protein Sequence:NP_001004686.1Re-query CCDS DB by Nucleotide ID:NM_001004686Re-query CCDS DB by Protein ID:NP_001004686Link to BLAST:NP_001004686.1
Original member Current member NCBI NM_001385855.1 NP_001372784.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001385855.1Link to Protein Sequence:NP_001372784.1Re-query CCDS DB by Nucleotide ID:NM_001385855Re-query CCDS DB by Protein ID:NP_001372784Link to BLAST:NP_001372784.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004686.1 312 Q8NH16 312 100% 0 0
NP_001372784.1 312 Q8NH16 312 100% 0 0

Chromosomal Locations for CCDS 31103.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248038268 248039206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAAAATTACAATCAAACATCAACTGATTTCATCTTATTGGGGCTGTTCCCACAATCAAGAATTGGCC
TTTTCGTATTCACCCTCATTTTTCTCATTTTCCTAATGGCTCTAATTGGAAATCTATCCATGATTCTTCT
CATCTTTTTGGACATCCATCTCCACACACCTATGTATTTCCTACTTAGTCAGCTCTCCCTCATTGACCTA
AATTACATCTCCACCATTGTTCCAAAGATGGTTTATGATTTTCTGTATGGAAACAAGTCTATCTCCTTCA
CTGGATGTGGGATTCAGAGTTTCTTCTTCTTGACTTTAGCAGTTGCAGAAGGGCTGCTCCTGACATCAAT
GGCCTATGATCGTTATGTGGCCATTTGCTTTCCTCTCCACTATCCCATCCGTATAAGCAAAAGAGTGTGT
GTGATGATGATAACAGGATCTTGGATGATAAGCTCTATCAACTCTTGTGCTCACACAGTATATGCACTCT
GTATCCCATATTGCAAGTCCAGAGCCATCAATCATTTTTTCTGTGATGTTCCAGCTATGTTGACGCTAGC
CTGCACAGACACTTGGGTCTATGAGAGCACAGTGTTTTTGAGCAGCACCATCTTTCTTGTGCTTCCTTTC
ACTGGTATTGCATGTTCCTATGGCCGGGTTCTCCTTGCTGTCTACCGCATGCACTCTGCAGAAGGGAGGA
AGAAGGCCTATTCAACCTGTAGCACCCACCTCACTGTAGTGTCCTTCTACTATGCACCCTTTGCTTATAC
CTATGTACGTCCAAGATCCCTGCGATCTCCAACAGAGGACAAGATTCTGGCTGTTTTCTACACCATCCTC
ACCCCAATGCTCAACCCCATCATCTACAGCCTGAGAAACAAGGAGGTGATGGGGGCCCTGACACAAGTGA
TTCAGAAAATCTTCTCAGTGAAAATGTAG

Translation (312 aa):
MENYNQTSTDFILLGLFPQSRIGLFVFTLIFLIFLMALIGNLSMILLIFLDIHLHTPMYFLLSQLSLIDL
NYISTIVPKMVYDFLYGNKSISFTGCGIQSFFFLTLAVAEGLLLTSMAYDRYVAICFPLHYPIRISKRVC
VMMITGSWMISSINSCAHTVYALCIPYCKSRAINHFFCDVPAMLTLACTDTWVYESTVFLSSTIFLVLPF
TGIACSYGRVLLAVYRMHSAEGRKKAYSTCSTHLTVVSFYYAPFAYTYVRPRSLRSPTEDKILAVFYTIL
TPMLNPIIYSLRNKEVMGALTQVIQKIFSVKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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