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Report for CCDS31421.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31421.1 Public Homo sapiens 11 OR10A3 24 110 108 CCDS HistoryNCBI Gene:26496Re-query CCDS DB by CCDS ID:31421.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31421.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000642047.1 ENSP00000493303.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000642047.1Link to Ensembl Protein Viewer:ENSP00000493303.1Re-query CCDS DB by Nucleotide ID:ENST00000642047Re-query CCDS DB by Protein ID:ENSP00000493303
Original member Current member NCBI NM_001003745.2 NP_001003745.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003745.2Link to Protein Sequence:NP_001003745.1Re-query CCDS DB by Nucleotide ID:NM_001003745Re-query CCDS DB by Protein ID:NP_001003745Link to BLAST:NP_001003745.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003745.1 314 P58181 314 100% 0 0

Chromosomal Locations for CCDS 31421.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 7938576 7939520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGAAAAGACAAAATCAAAGCTGTGTGGTTGAATTCATCCTCCTGGGCTTTTCTAACTTTCCTGAGCTCC
AGGTGCAGCTCTTTGGGGTTTTCCTAGTTATTTATGTGGTGACCCTGATGGGAAATGCCATCATTACAGT
CATCATCTCCTTAAACCAGAGCCTCCACGTTCCCATGTACCTGTTCCTCCTGAACCTATCTGTGGTGGAG
GTGAGTTTCAGTGCAGTCATTACGCCTGAAATGCTGGTGGTGCTCTCTACTGAGAAAACTATGATTTCTT
TTGTGGGCTGTTTTGCACAGATGTATTTCATCCTTCTTTTTGGTGGGACTGAATGTTTTCTCCTGGGAGC
GATGGCTTATGACCGATTTGCTGCAATTTGCCATCCTCTGAACTACCCAGTGATTATGAACAGAGGGGTT
TTTATGAAATTAGTAATATTCTCATGGATCTCAGGGATCATGGTGGCTACTGTGCAGACCACTTGGGTAT
TTAGTTTTCCATTTTGTGGCCCCAATGAAATTAATCATCTCTTCTGTGAGACTCCCCCGGTACTAGAGCT
TGTGTGTGCAGACACCTTCTTATTTGAAATCTATGCCTTCACAGGCACCATTTTGATTGTTATGGTTCCT
TTCTTGTTGATCCTCTTGTCTTACATTCGAGTTCTGTTTGCCATCCTGAAGATGCCATCAACTACTGGGA
GACAAAAGGCCTTTTCCACCTGTGCCTCTCACCTCACATCTGTGACCCTGTTCTATGGCACAGCCAATAT
GACTTATTTACAACCCAAATCTGGCTACTCACCCGAAACCAAGAAACTGATCTCATTGGCTTACACGTTG
CTTACCCCTCTGCTCAATCCGCTCATCTATAGCTTACGAAACAGTGAGATGAAGAGGACTTTGATAAAAC
TATGGCGAAGAAAAGTGATTTTACACACATTCTGA

Translation (314 aa):
MKRQNQSCVVEFILLGFSNFPELQVQLFGVFLVIYVVTLMGNAIITVIISLNQSLHVPMYLFLLNLSVVE
VSFSAVITPEMLVVLSTEKTMISFVGCFAQMYFILLFGGTECFLLGAMAYDRFAAICHPLNYPVIMNRGV
FMKLVIFSWISGIMVATVQTTWVFSFPFCGPNEINHLFCETPPVLELVCADTFLFEIYAFTGTILIVMVP
FLLILLSYIRVLFAILKMPSTTGRQKAFSTCASHLTSVTLFYGTANMTYLQPKSGYSPETKKLISLAYTL
LTPLLNPLIYSLRNSEMKRTLIKLWRRKVILHTF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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