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Report for CCDS29791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29791.1 Public Mus musculus 19 Cyp2c65 23 108 98 CCDS HistoryNCBI Gene:72303Re-query CCDS DB by CCDS ID:29791.1Re-query CCDS DB by GeneID:72303See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29791.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087236.4 ENSMUSP00000084489.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087236.4Link to Ensembl Protein Viewer:ENSMUSP00000084489.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000087236Re-query CCDS DB by Protein ID:ENSMUSP00000084489
Original member Current member NCBI NM_028191.2 NP_082467.2 Accepted alive Link to Nucleotide Sequence:NM_028191.2Link to Protein Sequence:NP_082467.2Re-query CCDS DB by Nucleotide ID:NM_028191Re-query CCDS DB by Protein ID:NP_082467Link to BLAST:NP_082467.2

Chromosomal Locations for CCDS 29791.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39061030 39061197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39069091 39069253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39069458 39069607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39072179 39072339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39073214 39073390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39082194 39082335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39087567 39087754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39090628 39090769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39093323 39093504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1473 nt):
ATGGTTCTAGGTGTGTTTCTGGGGCTTCTTCTCACATGTCTGCTTCTTCTTTCACTATGGAGGCAGAATT
CTCAGAGAAGAAACCTTCCTCCTGGCCCCACACCTCTCCCCATCATTGGAAATATTCTTCAGCTAGATCT
TAAGGACATCAGCAAATCTCTGAGGAATTTTTCAAAAGTCTATGGCCCTGTGTTCACTCTGTACTTGGGC
AGGAATCCTGCTGTGGTGTTACATGGATATGAAGCTGTGAAAGAAGCCTTTACTGATCATGGGGAGGAGT
TTGCTGGAAGAGGAGTTTTTCCAGTGTTTGATAAGTTTAAGAAAAACTGCGGGGTTGTTTTCAGCAGTGG
GAGGACCTGGAAAGAGATGAGACGCTTCTCACTCATGACTCTGCGAAACTTTGGGATGGGGAGGAGGAGC
ATTGAGGACCGAATTCAAGAGGAGGCTCGCTGTCTTGTGGATGAATTGAGGAAAACCAAAGGTGAACCCT
GTGATCCCACCTTCATCCTCGGCTGTGCTCCTTGCAATGTCATCTGCTCCATTGTTTTCCAGAATCGTTT
TGATTATAAAGATCAGGAATTCCTTACCTTCTTAGACATCTTAAATGAAAATGTGGAGATTCTGAGTTCC
CCTTGGATTCAGATTTGCAATAATTTTCCTGCTGTCATTGATTATCTACCAGGAAGACACAGAAAATTAC
ATAAAAATTTTGCCTTTGCAGAACATTACTTTTTGTCAAAAGTAAAACAGCATCAAGAGTCACTGGATAT
TAACAATCCTCGGGACTTTATTGATTGTTTCCTGATCAAAATGGAACAGGAAAAGCACAACCCAAAGACG
GAGTTTACTTGTGAGAACTTGGTCTTCACAGCATCTGATCTGTTTGCTGCTGGGACAGAGACAACAAGCA
CAACCCTGAGGTACTCTCTGCTGCTCCTGCTCAAGTATCCAGAAGTCACAGCCAAAGTCCAGGAAGAGAT
CGACTGTGTGATTGGCAGACACAGGAGCCCCTGCATGCAGGACAGGCATAGCATGCCCTACACTGATGCT
GTGTTGCATGAGATCCAGAGATACATTGATCTCCTTCCCACCAGCCTTCCCCATGCCGTGACCCGTGACG
TGAAATTCAGAGAGTATCTCATTCCCAAGGGCACCACTGTCATAGCATCACTGACTTCTGTGCTATATGA
TGATAAAGAATTCCCCAACCCAGAGAAGTTTGACCCCAGTCACTTTCTGGATGAGCGTGGCAAGTTTAAG
AAAAGTGACTACTTTTTTCCTTTCTCAACAGGAAAACGGATTTGTGTGGGAGAGGGTCTGGCTCGAGCAG
AATTATTTTTATTCCTGACCACCATTTTACAGAACTTTAACTTGAAATCTCCAGTTGATCTAAAAGACCT
TGATACTACTCCAGTTGCCAATGGATTTGCTTCTGTGCCACCCAAGTTCCAGATATGCTTCATTCCCATC
TAA

Translation (490 aa):
MVLGVFLGLLLTCLLLLSLWRQNSQRRNLPPGPTPLPIIGNILQLDLKDISKSLRNFSKVYGPVFTLYLG
RNPAVVLHGYEAVKEAFTDHGEEFAGRGVFPVFDKFKKNCGVVFSSGRTWKEMRRFSLMTLRNFGMGRRS
IEDRIQEEARCLVDELRKTKGEPCDPTFILGCAPCNVICSIVFQNRFDYKDQEFLTFLDILNENVEILSS
PWIQICNNFPAVIDYLPGRHRKLHKNFAFAEHYFLSKVKQHQESLDINNPRDFIDCFLIKMEQEKHNPKT
EFTCENLVFTASDLFAAGTETTSTTLRYSLLLLLKYPEVTAKVQEEIDCVIGRHRSPCMQDRHSMPYTDA
VLHEIQRYIDLLPTSLPHAVTRDVKFREYLIPKGTTVIASLTSVLYDDKEFPNPEKFDPSHFLDERGKFK
KSDYFFPFSTGKRICVGEGLARAELFLFLTTILQNFNLKSPVDLKDLDTTPVANGFASVPPKFQICFIPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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