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Report for CCDS21584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21584.1 Public Mus musculus 7 Or51b6b 23 108 98 CCDS HistoryNCBI Gene:259126Re-query CCDS DB by CCDS ID:21584.1Re-query CCDS DB by GeneID:259126See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21584.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068531.4 ENSMUSP00000070658.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068531.4Link to Ensembl Protein Viewer:ENSMUSP00000070658.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000068531Re-query CCDS DB by Protein ID:ENSMUSP00000070658
Original member Current member EBI ENSMUST00000213840.1 ENSMUSP00000150141.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213840.1Link to Ensembl Protein Viewer:ENSMUSP00000150141.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213840Re-query CCDS DB by Protein ID:ENSMUSP00000150141
Original member Current member NCBI NM_147122.2 NP_667333.2 Accepted alive Link to Nucleotide Sequence:NM_147122.2Link to Protein Sequence:NP_667333.2Re-query CCDS DB by Nucleotide ID:NM_147122Re-query CCDS DB by Protein ID:NP_667333Link to BLAST:NP_667333.2

Chromosomal Locations for CCDS 21584.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103660295 103661248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGCCTGTAATTTGGCTCAACACCTCAACCTACCCATTCCTGCTCACAGGCTTCCCAGGTCTGGAGAAAT
CCCATCACCTGATCTCCCTCCCATTACTGATGGCCTATATCTTCATATTGCTTGGCAACGGCACCCTCCT
TTTCCTCATTAAGGATGACCACAACCTCCATGAGCCCATGTATTATTTCTTAGGTATGCTGGCAGCTACG
GATCTTGGAGTAACATTGACCACCATGCCCACAGTGCTGGGTGTACTATGGTTCAATCACAGGGAAATTG
GCCATGGAGCCTGCTTCTCTCAGGCCTATTTTATCCATAGTTTCTCTATTGTGGAGTCGGGGGTCTTGCT
TGCCATGGCCTATGACCGTTTCATTGCCATTCGCAACCCATTAAGATATACCACCATCCTTACTGATATT
AAGGTAATAAAGATTGGCATAGGCGTAGTGATGAGGGCTGGTCTTTCAATCATGCCAATAATCATTCGAC
TGAATTGGTTTCCCTATTGTCGCTCCCATGTACTCTCCCATGCTTTCTGTCTACACCAAGATGTCATCAA
GCTAGCCTGTGCTGACATCACATTCAATCGTCTCTATCCTATTGTTGTTGTATTTTGCATGGGACTTTTG
GATTTTTTGATTATTTGTTTCTCCTACATTTTGATTCTCAAGACTGTCATGGGCATTGCTTCTACAGATG
AGCGGGCCAAGGCTCTCAACACATGTGTCTCCCATATCTGTTGCATCTTGGTCTTCTATGTCACTGTGGT
TGGTTTGACATTTATTCACAGGTTTGGAAAGAATATTCCTCATATTGTACATATAACAATGAGCTACATC
TGCTTCCTTTTCCCCCCATTTATGAACCCTGTCATCTTCAGTATTAAGACCAAACAGATTCAGAGTGGTT
TGCTTCGCTTGTTCTCACTGCCTTATTCTAGAACTCGACTCTGA

Translation (317 aa):
MPVIWLNTSTYPFLLTGFPGLEKSHHLISLPLLMAYIFILLGNGTLLFLIKDDHNLHEPMYYFLGMLAAT
DLGVTLTTMPTVLGVLWFNHREIGHGACFSQAYFIHSFSIVESGVLLAMAYDRFIAIRNPLRYTTILTDI
KVIKIGIGVVMRAGLSIMPIIIRLNWFPYCRSHVLSHAFCLHQDVIKLACADITFNRLYPIVVVFCMGLL
DFLIICFSYILILKTVMGIASTDERAKALNTCVSHICCILVFYVTVVGLTFIHRFGKNIPHIVHITMSYI
CFLFPPFMNPVIFSIKTKQIQSGLLRLFSLPYSRTRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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