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Report for CCDS39056.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39056.1 Public Mus musculus 5 Mrpl33 23 108 98 CCDS HistoryNCBI Gene:66845Re-query CCDS DB by CCDS ID:39056.1Re-query CCDS DB by GeneID:66845See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39056.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031024.13 ENSMUSP00000031024.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031024.13Link to Ensembl Protein Viewer:ENSMUSP00000031024.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031024Re-query CCDS DB by Protein ID:ENSMUSP00000031024
Original member Current member NCBI NM_025796.3 NP_080072.2 Accepted alive Link to Nucleotide Sequence:NM_025796.3Link to Protein Sequence:NP_080072.2Re-query CCDS DB by Nucleotide ID:NM_025796Re-query CCDS DB by Protein ID:NP_080072Link to BLAST:NP_080072.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080072.2 65 Q9CQP0 65 100% 0 0

Chromosomal Locations for CCDS 39056.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 31614001 31614022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31614603 31614621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31616381 31616487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 31622377 31622426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (198 nt):
ATGCTGCTCTCCGCTGTCTCTTTTGCCAAGAGCAAGTCAAAAACTATCCTGGTGAAACTAGTGAGCCAAG
CTGGGACAGGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCGAGAGAAGCTGAGCCTTCTGCACTATGA
TCCAATAGTGAACAAAAAAGTTCTCTTTGTGGAACAGAAAAAAATCCGTTCCCTCTGA

Translation (65 aa):
MLLSAVSFAKSKSKTILVKLVSQAGTGFSFNHKRSRLREKLSLLHYDPIVNKKVLFVEQKKIRSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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