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Report for CCDS40739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40739.1 Public Mus musculus 9 Esyt3 23 108 98 CCDS HistoryNCBI Gene:272636Re-query CCDS DB by CCDS ID:40739.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40739.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042158.12 ENSMUSP00000038757.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042158.12Link to Ensembl Protein Viewer:ENSMUSP00000038757.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000042158Re-query CCDS DB by Protein ID:ENSMUSP00000038757
Original member Current member NCBI NM_177775.3 NP_808443.2 Accepted alive Link to Nucleotide Sequence:NM_177775.3Link to Protein Sequence:NP_808443.2Re-query CCDS DB by Nucleotide ID:NM_177775Re-query CCDS DB by Protein ID:NP_808443Link to BLAST:NP_808443.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808443.2 891 Q5DTI8-1 891 100% 0 0

Chromosomal Locations for CCDS 40739.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 99311641 99311677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99311946 99311995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99315187 99315292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99316646 99316777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99317206 99317304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99317888 99318387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99319503 99319652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99320255 99320341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99320834 99320902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99321382 99321444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99321527 99321589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99322098 99322187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99322597 99322645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99324158 99324240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99324897 99325067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99327899 99328019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99329756 99329811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99330701 99330790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99331359 99331425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99332806 99332882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99336065 99336199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99338768 99338809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99358051 99358389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2676 nt):
ATGCAGCCGGAGGAGCCCTGCGCCCCGAGCGCGCCCGGCGGTCCTGACGTCCCGGAGAGAGGCCAGCGCT
CGCGGGACCCCGGACCGCGCCTGTCGGGCCAGCTACTGCCCGAGCTCTACAGCTTCGTGGCGCGCGTCCT
TTTCTACCTGGCACCGGTCTACCTGGCGGGCTACCTGGGGCTCAGCGTCACCTGGCTGCTGCTTGGCGCC
CTGCTCTGGATGTGGTGGCGCCGGAACCGCCGCGGGAAGCTGGGGCGCTTGGAGGCCGCCTTCGAATTCC
TGGAGCACGAGCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTCCC
AGATGTGGAGCGTGTGGAGTGGGCCAATAAGATCATCATACAGATCTGGCCCTACCTAAGCATGATCATG
GAGAACAAGATCCGGGAGAAGCTGGAGCCCAAGATCCGGGAGAAGAGCATCCACCTCAGAACCTTCACCT
TCACCAAGCTCTACTTTGGGCAGAAGTGTCCCAAGGTGAACGGCGTCAAGGTACACACGGACAAACGCAA
CCGGAGGAAAGTGACCCTGGACCTGCAGATCTGCTACATCGGGGACTGTGAGATCAGCGTGGAACTTCAG
AAGATCCGGGGCGGTGTGAGCGGCGTCCAGTTGCAGGGGACCCTGCGTGTCATTCTGGAGCCCCTGCTGG
TGGACAAGCCCTTCATAGGAGCTGTGACAGTGTTCTTCCTTCAAAAGCCGCACCTGCAGATTAACTGGAC
AGGCTTGACCAACCTGCTGGACATGCCGGGGATCAATGAGTTATCAGACAGCCTGCTGGAGGACCTCATT
GCTGCCCACCTGGTGCTGCCCAACCGTGTGACTGTGCCTGTGAAGAAGGGGCTCGATGTAACCAACCTGC
GCGTCCCTCTCCCCTGTGGTGTGATCCGAGTCCATTTGCTGGAGGCCAAGAAGCTGGCCCAGAAGGACAA
CTTCCTAGGGCTCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGC
AGAACCATCTACAAGAACCTGAACCCCACCTGGAATGAAGTATTTGAGTTTATGGTGTACGAGGTACCTG
GGCAGGACCTGGAGGTGGACCTGTATGATGAGGATACTGACAAGGATGACTTCCTGGGCAGCCTGCAGAT
CTGCCTTGGAGATGTCATGAAGAACAGAGTGGTGGATGAGTGGTTTGCCCTGAATGACACGACCAGTGGG
CGGCTGCACCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCAGGAAGCGCTGACGGAGAATGATAGTG
GCCTCTCCACTGCCATCCTCGTGGTCTTCTTAGAGAATGCCTGCAACCTGCCGAGAAACCCTTTTGACTA
TCTGAATGGTGAATATCGAGCCAAAAAACTCTCCAGGTTTGTCAAAAATAAGGCCAGCAGAGACCCTTCT
TCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGACTTGTCCCCACAGCAAGGACCCTG
TGTGGAGCCAGGTGTTCTCCTTCTTTGTGCACAGCGTGGCAGCCGAGCAGCTCTGCCTGAAGGTGCTGGA
CGATGAGCTAGAGTGTGCTCTGGGAGTGCTGGAGTTCCCCCTGTGCCGGATCCTCCCCTGTGCTGACCTC
ACCCTCGAACAGTGCTTCCAGCTGGATCACTCAGGCCTGGACAGCCTCATCTCCATGAGGCTGGTGCTTC
GGTTCCTACGTGTGGAGGGACGAGAGCTGGGAAGCCCATACACTGGACCCGACGCTCTAAAGAAAGGTCC
TCTGTTCATCAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCCACCCCTAAACGAAGGCCTTGCAGAT
GTGACAAGCACCTCGAACCCTGCCTCTTACATCAAAGGAGCCTCCAAGAGCATTGACAATATCAGCGCAG
CCACCACAGACCCTGAACCTATGCCTGAGCCCCAGGGGCCAGGCCCGGAGCCCAAAGGCAAGGACAGTGC
CAGAGGGCTCTGTGAGTCCCCTGGAAAGAAGAAGAACCCAGCTACCACCTTCCTGACTGTCCCAGGTCTC
CACTCTCCAGGGCCCATCAAGTCACCCAGACCCATGAGCCGCCCTGCCTTCCCATTCGCATGGCCACTCA
CGAGGGTGGCTCCCAGCATGTCCTCACTCAACTCCCTGGCCTCTTCCTGCTTTGACCTGACAGATGTCAG
CCTCAACACTGAAGCTGGGGATTCCAGGCAGGGACGGCTGGGTGAGATTCAGCTCACAGTGCGCTATGTG
TGTCTCCGACACTGTCTCAGAGTGCTGGTCAACGGCTGCAGAAACTTAACACCATGCACCAGCAGTGGAG
CTGACCCCTACGTCCGCATCTACCTGCTGCCAGAGAGAAGATGGGCGAGTCGGAAGAAGACCTCAGTAAA
ACAGAAGACCCTGGAGCCCCTATTCGATGAGACGTTTGAGTTTTTTGTCCCCATGGGAGAAGTGCAGAAG
AGATCACTGGATGTCGCAGTGAAAAACAGCAGGCCTCTCGGCTCACACAGAAGGAAGGAGTTGGGGAAAG
TGCTGATTGACTTATCAAAGCAAGATCTGATTAAGGGCTTCTCACAGTGGTATGAACTGACTGCAGATGG
ACAGCCCAGAAGCTGA

Translation (891 aa):
MQPEEPCAPSAPGGPDVPERGQRSRDPGPRLSGQLLPELYSFVARVLFYLAPVYLAGYLGLSVTWLLLGA
LLWMWWRRNRRGKLGRLEAAFEFLEHEREFISRELRGQHLPAWIHFPDVERVEWANKIIIQIWPYLSMIM
ENKIREKLEPKIREKSIHLRTFTFTKLYFGQKCPKVNGVKVHTDKRNRRKVTLDLQICYIGDCEISVELQ
KIRGGVSGVQLQGTLRVILEPLLVDKPFIGAVTVFFLQKPHLQINWTGLTNLLDMPGINELSDSLLEDLI
AAHLVLPNRVTVPVKKGLDVTNLRVPLPCGVIRVHLLEAKKLAQKDNFLGLGGKSDPYAKVSIGLQHCRS
RTIYKNLNPTWNEVFEFMVYEVPGQDLEVDLYDEDTDKDDFLGSLQICLGDVMKNRVVDEWFALNDTTSG
RLHLRLEWLSLLTDQEALTENDSGLSTAILVVFLENACNLPRNPFDYLNGEYRAKKLSRFVKNKASRDPS
SYVKLTVGKKTFTSKTCPHSKDPVWSQVFSFFVHSVAAEQLCLKVLDDELECALGVLEFPLCRILPCADL
TLEQCFQLDHSGLDSLISMRLVLRFLRVEGRELGSPYTGPDALKKGPLFIKKVATNQGCKAPPLNEGLAD
VTSTSNPASYIKGASKSIDNISAATTDPEPMPEPQGPGPEPKGKDSARGLCESPGKKKNPATTFLTVPGL
HSPGPIKSPRPMSRPAFPFAWPLTRVAPSMSSLNSLASSCFDLTDVSLNTEAGDSRQGRLGEIQLTVRYV
CLRHCLRVLVNGCRNLTPCTSSGADPYVRIYLLPERRWASRKKTSVKQKTLEPLFDETFEFFVPMGEVQK
RSLDVAVKNSRPLGSHRRKELGKVLIDLSKQDLIKGFSQWYELTADGQPRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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