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Report for CCDS5594.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5594.1 Public Homo sapiens 7 MAGI2 24 110 108 CCDS HistoryNCBI Gene:9863Re-query CCDS DB by CCDS ID:5594.1Re-query CCDS DB by GeneID:9863See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5594.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354212.9 ENSP00000346151.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354212.9Link to Ensembl Protein Viewer:ENSP00000346151.4Re-query CCDS DB by Nucleotide ID:ENST00000354212Re-query CCDS DB by Protein ID:ENSP00000346151
Original member Current member NCBI NM_012301.4 NP_036433.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012301.4Link to Protein Sequence:NP_036433.2Re-query CCDS DB by Nucleotide ID:NM_012301Re-query CCDS DB by Protein ID:NP_036433Link to BLAST:NP_036433.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036433.2 1455 Q86UL8-1 1455 100% 0 0

Chromosomal Locations for CCDS 5594.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 78019315 78019976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78078947 78079085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78125694 78125837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78127197 78127416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78132889 78133060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78135021 78135206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78160025 78160273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78167916 78168108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78178011 78178102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78185629 78185670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78194874 78195063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78201162 78201193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78255943 78256581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78343778 78343960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78345922 78346043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78369156 78369213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78489761 78489840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78501577 78501787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78521430 78521645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78627120 78627239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79007090 79007206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79453020 79453320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4368 nt):
ATGTCCAAAAGCTTGAAAAAGAAAAGCCACTGGACTAGCAAAGTCCATGAGAGTGTCATTGGCAGGAACC
CGGAGGGCCAGCTGGGCTTTGAACTGAAGGGGGGCGCCGAGAATGGACAGTTCCCCTACCTGGGGGAGGT
GAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGGAGCTGCTGCTGGAGGTGAAC
GAGACCCCCGTGGCGGGGCTCACCATCAGGGACGTGCTGGCCGTGATCAAACACTGCAAGGACCCCCTCC
GGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGATAAAGACCTTCGTCACTACCTCAACTTACGATTTCA
AAAGGGTTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGACAACCTCTACCTCCGCACGGTGCCATGC
ACCACAAGGCCACATAAGGAGGGTGAGGTCCCTGGAGTGGATTATATTTTCATCACTGTTGAAGATTTTA
TGGAATTGGAGAAAAGTGGTGCTCTCCTAGAAAGTGGGACTTATGAAGACAATTACTACGGTACCCCAAA
GCCGCCAGCAGAACCAGCACCATTATTGTTAAATGTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT
GCTGAAGGAAAACGGAAGAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTGAGG
AGGAAGAGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAGTAGTAACACCAGAATCCAGTGAACATGA
AGACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT
GAGGAGCTGAAGGAGCAGATGGATGACACAAAGCCAACTAAACCTGAAGACAATGAGGAACCAGACCCAT
TGCCTGATAACTGGGAAATGGCCTATACAGAGAAGGGCGAAGTCTACTTCATTGACCATAACACAAAGAC
AACATCATGGCTGGATCCACGACTTGCGAAAAAGGCTAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTT
CCATATGGCTGGGAAAAAATCGATGATCCCATTTATGGCACTTATTATGTTGACCACATAAATAGAAGAA
CACAGTTTGAAAATCCTGTCCTGGAAGCAAAAAGGAAGCTACAGCAACATAACATGCCCCACACAGAACT
TGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGATGCATCCCAGTTG
AAGGGAACATTCCTCAGCACCACCCTAAAAAAGAGCAACATGGGCTTTGGATTTACCATCATTGGTGGAG
ACGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAAAT
GGAAACAGGTGATGTCATTGTCTATATTAATGAAGTTTGTGTCCTTGGACACACTCATGCAGATGTTGTC
AAACTTTTCCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGTGTTGTGTCGTGGCTACCCTTTGCCCT
TTGATCCTGAAGACCCTGCTAACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGAT
GGTCAATGGAAGACACAACTATGAAACATATTTGGAGTACATTTCTCGGACCTCACAGTCAGTTCCAGAT
ATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTATCCAC
CGCCCGTCCATGATGACAATGTGTCTATGGCTTCATCTGGGGCCACCCAAGCTGAACTTATGACCTTAAC
CATTGTGAAAGGTGCCCAGGGCTTCGGCTTCACTATTGCCGACAGTCCTACAGGACAGCGGGTGAAACAA
ATACTTGACATTCAGGGATGCCCTGGCCTGTGTGAAGGCGACCTCATTGTTGAGATCAACCAGCAGAATG
TACAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGAAGTGAAACTTCTTT
GATTATCCATCGAGGAGGTTTCTTTTCTCCATGGAAAACTCCAAAGCCTATAATGGACCGATGGGAGAAT
CAAGGCAGTCCTCAAACGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGCCCTTCCCACCTGCCCTTC
ACAGGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACCCACGGAAGCCTGATCCATATGAGCTCTACGA
GAAATCTAGGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCT
GGTCCAGATTATAAGGAATTGGATGTTCATCTTCGGAGGATGGAGTCTGGATTTGGCTTCAGAATCCTCG
GGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAGAGATGG
CCGCCTTCACCCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCACCGCTAT
GTCATCGACCTCATGCACCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGTGAGAAGAAAGGTGCTAT
GTGGAGGGGAGCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG
CAGTGACTACGCAACCTACACCAACAGCAACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTGAAGGC
TTCGCCTCCCACAGCCTGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGAATGAGGGCTTCGGCTTTG
TCATCATCAGCTCCCTGAACAGGCCTGAGTCTGGATCCACTATAACTGTGCCCCATAAAATCGGACGCAT
CATTGATGGGAGTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAGACCGGATCCTAGCAGTGAATGGC
CAGTCTATCATCAACATGCCTCACGCTGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACCC
TTCGCATCATTCCTCAGGAGGAGCTCAACAGCCCCACCTCGGCACCCAGCTCAGAGAAGCAGAGTCCCAT
GGCGCAGCAGAGTCCCCTGGCACAGCAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCC
ATCGCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGACACGAAAATAGTTACAGGTCGGAAGTGA
AAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAGCCCCCGCTGGA
TTACAGGCAACCCCCAGGAGGGGACTACCAGCAGCCCCCACCCTTGGACTACAGGCAGCCTCCCCTACTG
GACTACAGGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
ATTATTTCACTGTGGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAAGGGAATA
CAAAATGGATTTGTATGTGTTGAGACTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGATGAGGGTA
GGAGATCAAATCATTGAAATCAATGGGGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCA
TCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTCAAGAGAGGCACGGGACAGGTCCCAGAATATGACGA
ACCCGCCCCCTGGAGTTCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTAGGCGTCTCCCTGGACGAC
GGCCTCGCTCCATTCTCTCCATCACATCCAGCCCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCC
CAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAA
GCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCTCGAGGAG
GCGCCCGGCGGCCAGGGGCGGCCCGAGGCCGGCAGGCCCGCCTCGGAGGCCAGGGCGCCCGGGCTCGCGG
CGGCAGACGCGGCGGACGCGGCGCGGGCGGGCGGGAAGGAGGCGCCCCGTGCGGCGGCGGGCTCCGAGCT
CTGCCGGCGCGAAGGCCCGGGGGCTGCGCCGGCGTTTGCCGGCCCGGGCGGCGGCGGCAGCGGCGCGCTG
GAGGCCGAGGGCAGGGCGGGTGCGCGCGCGGGTCCCCGGCCGGGCCCGCGACCCCCGGGGGGCGCCCCGG
CGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAA
ACCCGGCGCCTCGGCCGCCAGCAGATGA

Translation (1455 aa):
MSKSLKKKSHWTSKVHESVIGRNPEGQLGFELKGGAENGQFPYLGEVKPGKVAYESGSKLVSEELLLEVN
ETPVAGLTIRDVLAVIKHCKDPLRLKCVKQGGIVDKDLRHYLNLRFQKGSVDHELQQIIRDNLYLRTVPC
TTRPHKEGEVPGVDYIFITVEDFMELEKSGALLESGTYEDNYYGTPKPPAEPAPLLLNVTDQILPGATPS
AEGKRKRNKSVSNMEKASIEPPEEEEEERPVVNGNGVVVTPESSEHEDKSAGASGEMPSQPYPAPVYSQP
EELKEQMDDTKPTKPEDNEEPDPLPDNWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKENEL
PYGWEKIDDPIYGTYYVDHINRRTQFENPVLEAKRKLQQHNMPHTELGTKPLQAPGFREKPLFTRDASQL
KGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVV
KLFQSVPIGQSVNLVLCRGYPLPFDPEDPANSMVPPLAIMERPPPVMVNGRHNYETYLEYISRTSQSVPD
ITDRPPHSLHSMPTDGQLDGTYPPPVHDDNVSMASSGATQAELMTLTIVKGAQGFGFTIADSPTGQRVKQ
ILDIQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGGFFSPWKTPKPIMDRWEN
QGSPQTSLSAPAIPQNLPFPPALHRSSFPDSTEAFDPRKPDPYELYEKSRAIYESRQQVPPRTSFRMDSS
GPDYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRY
VIDLMHHAARNGQVNLTVRRKVLCGGEPCPENGRSPGSVSTHHSSPRSDYATYTNSNHAAPSSNASPPEG
FASHSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNG
QSIINMPHADIVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQSPMAQQSPLAQQSPLAQPSPATPNSP
IAQPAPPQPLQLQGHENSYRSEVKARQDVKPDIRQPPFTDYRQPPLDYRQPPGGDYQQPPPLDYRQPPLL
DYRQHSPDTRQYPLSDYRQPQDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRV
GDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDEPAPWSSPAAAAPGLPEVGVSLDD
GLAPFSPSHPAPPSDPSHQISPGPTWDIKREHDVRKPKELSACGQKKQRLGEQRERSASPQRAARPRLEE
APGGQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGAL
EAEGRAGARAGPRPGPRPPGGAPARKAAVAPGPWKVPGSDKLPSVLKPGASAASR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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