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Report for CCDS23922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23922.1 Public Mus musculus 10 Gnaz 23 108 98 CCDS HistoryNCBI Gene:14687Re-query CCDS DB by CCDS ID:23922.1Re-query CCDS DB by GeneID:14687See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23922.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037813.4 ENSMUSP00000036087.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037813.4Link to Ensembl Protein Viewer:ENSMUSP00000036087.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000037813Re-query CCDS DB by Protein ID:ENSMUSP00000036087
Original member Current member EBI ENSMUST00000159991.1 ENSMUSP00000124639.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159991.1Link to Ensembl Protein Viewer:ENSMUSP00000124639.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000159991Re-query CCDS DB by Protein ID:ENSMUSP00000124639
Original member NCBI NM_001358848.1 NP_001345777.1 Updated not alive Link to Nucleotide Sequence:NM_001358848.1Link to Protein Sequence:NP_001345777.1Re-query CCDS DB by Nucleotide ID:NM_001358848Re-query CCDS DB by Protein ID:NP_001345777
Current member NCBI NM_001358848.2 NP_001345777.1 Accepted alive Link to Nucleotide Sequence:NM_001358848.2Link to Protein Sequence:NP_001345777.1Re-query CCDS DB by Nucleotide ID:NM_001358848Re-query CCDS DB by Protein ID:NP_001345777Link to BLAST:NP_001345777.1
Original member NCBI NM_010311.4 NP_034441.1 Updated not alive Link to Nucleotide Sequence:NM_010311.4Link to Protein Sequence:NP_034441.1Re-query CCDS DB by Nucleotide ID:NM_010311Re-query CCDS DB by Protein ID:NP_034441
Current member NCBI NM_010311.5 NP_034441.1 Accepted alive Link to Nucleotide Sequence:NM_010311.5Link to Protein Sequence:NP_034441.1Re-query CCDS DB by Nucleotide ID:NM_010311Re-query CCDS DB by Protein ID:NP_034441Link to BLAST:NP_034441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345777.1 355 O70443 355 100% 0 0
NP_034441.1 355 O70443 355 100% 0 0

Chromosomal Locations for CCDS 23922.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 74991418 74992140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75014868 75015212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGGGATGTCGGCAAAGCTCAGAGGAAAAAGAGGCAGCGAGGCGGTCCCGGAGAATTGACCGCCACCTGC
GCTCCGAAAGCCAGCGGCAGCGCCGTGAAATCAAACTTCTCCTGCTGGGCACCAGCAACTCGGGCAAGAG
CACCATCGTCAAGCAGATGAAGATCATCCACAGCGGGGGCTTCAACCTGGACGCCTGCAAGGAGTACAAG
CCCCTCATCATCTACAACGCCATCGACTCGCTGACCCGGATCATCCGGGCCCTGGCTGCCCTCAAGATCG
ATTTCCACAACCCTGACCGTGCCTACGACGCTGTGCAGCTCTTTGCTCTGACTGGCCCAGCAGAGAGCAA
GGGTGAGATTACACCTGAGCTGCTGGGTGTCATGCGACGGCTCTGGGCTGACCCAGGGGCCCAGGCCTGC
TTTGGCCGCTCTAGCGAGTACCACCTGGAGGACAATGCAGCCTACTACCTGAACGACCTGGAGCGCATCG
CAGCGCCCGACTACATCCCCACGGTGGAGGATATCCTACGCTCCCGGGACATGACCACGGGCATTGTGGA
GAACAAGTTCACCTTCAAGGAGCTTACCTTCAAGATGGTGGACGTGGGCGGGCAGAGGTCAGAACGCAAA
AAGTGGATCCATTGCTTTGAAGGCGTCACAGCCATCATCTTCTGTGTGGAGCTCAGTGGCTATGACCTGA
AGCTCTATGAGGACAACCAGACGAGCCGGATGGCGGAGAGCCTGCGCCTCTTTGACTCCATCTGCAACAA
CAACTGGTTCATCAACACCTCGCTCATCCTCTTCCTGAACAAGAAGGACCTCCTGGCAGAGAAGATCCGG
CGTATCCCGCTCAGCGTCTGCTTCCCAGAGTACAAGGGTCAGAACACGTACGAGGAAGCCGCGGTCTACA
TCCAACGTCAGTTCGAGGACCTCAACCGCAACAAGGAGACCAAGGAGATCTATTCGCACTTCACTTGTGC
CACCGACACCAGTAACATCCAGTTTGTGTTTGACGCAGTGACAGATGTCATCATACAGAACAATCTCAAG
TACATCGGCCTTTGCTGA

Translation (355 aa):
MGCRQSSEEKEAARRSRRIDRHLRSESQRQRREIKLLLLGTSNSGKSTIVKQMKIIHSGGFNLDACKEYK
PLIIYNAIDSLTRIIRALAALKIDFHNPDRAYDAVQLFALTGPAESKGEITPELLGVMRRLWADPGAQAC
FGRSSEYHLEDNAAYYLNDLERIAAPDYIPTVEDILRSRDMTTGIVENKFTFKELTFKMVDVGGQRSERK
KWIHCFEGVTAIIFCVELSGYDLKLYEDNQTSRMAESLRLFDSICNNNWFINTSLILFLNKKDLLAEKIR
RIPLSVCFPEYKGQNTYEEAAVYIQRQFEDLNRNKETKEIYSHFTCATDTSNIQFVFDAVTDVIIQNNLK
YIGLC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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