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Report for CCDS19637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19637.1 Public Mus musculus 5 Adam1a 23 108 98 CCDS HistoryNCBI Gene:280668Re-query CCDS DB by CCDS ID:19637.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19637.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100757.5 ENSMUSP00000098320.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100757.5Link to Ensembl Protein Viewer:ENSMUSP00000098320.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100757Re-query CCDS DB by Protein ID:ENSMUSP00000098320
Original member Current member NCBI NM_172126.2 NP_742124.2 Accepted alive Link to Nucleotide Sequence:NM_172126.2Link to Protein Sequence:NP_742124.2Re-query CCDS DB by Nucleotide ID:NM_172126Re-query CCDS DB by Protein ID:NP_742124Link to BLAST:NP_742124.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_742124.2 791 Q60813 791 100% 0 0

Chromosomal Locations for CCDS 19637.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 121518853 121521228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2376 nt):
ATGTCAGTGGCAGCAGCGGGGAGAGGGTTTGCCTCCAGTCTGTCTTCCCCACAGATCAGGCGAATAGCCT
TA
AAAGAAGCTAAGCTAACACCTCACATCTGGGCGGCACTGCACTGGAACTTGGGACTGAGACTAGTGCC
A
TCTGTCAGAGTAGGGATTTTGGTGCTACTGATTTTTCTCCCGAGCACGTTCTGTGACATTGGATCTGTA
TAT
AATTCTTCCTATGAAACTGTCATCCCTGAGAGACTGCCAGGCAAGGGGGGGAAAGACCCTGGAGGGA
AG
GTGTCCTACATGCTATTGATGCAAGGCCAAAAGCAGCTGCTTCACCTCGAGGTAAAGGGACACTACCC
T
GAGAATAACTTCCCAGTCTACAGTTACCACAATGGCATCCTGAGGCAAGAAATGCCTCTCCTCTCCCAG
GAC
TGCCACTATGAAGGCTACATGGAAGGGGTGCCAGGCTCCTTTGTTTCTGTCAACATCTGTTCAGGCC
TC
AGGGGGGTCTTGATTAAAGAGGAAACATCCTATGGCATTGAGCCCATGCTCTCTTCCAAAAACTTTGA
A
CATGTCCTCTACACCATGGAGCATCAGCCTGTGGTCTCCTGCAGTGTCACTCCCAAAGACAGCCCTGGG
GAC
ACCAGCCATCCACCAAGGAGCAGGAAGCCCGATGACCTACTGGTTCTGACTGACTGGTGGTCACACA
CC
AAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGA
G
ACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTTCACTAGGGGGATAAACACAGAGGTG
GTG
CTGGTGGGCCTGGAAATCTGGACAGAGGGGGACCCGATAGAGGTCCCAGTGGACCTGCAGACCACAC
TC
AGGAATTTCAACTTCTGGAGACAGGAGAAACTCGTGGGCCGGGTCAGGCACGATGTGGCACACTTGAT
C
GTCGGGCATCGCCCAGGAGAGAACGAGGGCCAGGCGTTTCTCCGTGGTGCCTGTTCGGGTGAGTTTGCG
GCG
GCCGTGGAGGCCTTCCATCATGAAGATGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGC
AC
AACCTGGGTATCCAGCACGACCACCCGACCTGCACCTGTGGTCCCAAGCACTTCTGCCTCATGGGTGA
G
AAGATCGGTAAGGACAGTGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCAC
AGA
GGGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATG
GT
GTGGTGGAGGACTTGGAGGAGTGTGACTGCGGCAGTGACTGTGACAGTCACCCGTGCTGTTCGCCAAC
A
TGTACGCTTAAGGAGGGTGCGCAGTGCAGTGAGGGACTCTGCTGCTACAACTGTACATTCAAGAAGAAA
GGG
AGCTTATGCCGTCCTGCTGAGGATGTGTGTGACCTTCCCGAGTATTGTGACGGCAGTACTCAGGAAT
GC
CCTGCAAACAGCTACATGCAGGATGGCACACAGTGTGATAGGATTTATTACTGCTTGGGGGGTTGGTG
T
AAGAACCCTGATAAACAATGTTCAAGGATCTATGGGTATCCTGCAAGATCTGCCCCTGAGGAATGTTAC
ATT
TCAGTTAATACTAAGGCGAACCGGTTTGGAAACTGTGGCCATCCCACCTCCGCTAACTTCAGATATG
AA
ACATGTTCCGATGAGGATGTATTTTGTGGGAAACTGGTGTGTACAGATGTTAGATACCTGCCCAAAGT
C
AAACCCCTACACTCACTCCTCCAGGTTCCTTATGGAGAGGACTGGTGTTGGAGTATGGATGCCTATAAC
ATC
ACAGATGTCCCGGATGACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGG
AG
TATATCTGCACTGGTCGTGGGGTGCTCCAGTACAACTGTGAGCCACAGGAAATGTGTCACGGGAATGG
A
GTGTGCAACAATTTCAAGCACTGTCACTGCGATGCTGGCTTCGCCCCTCCTGACTGTAGCAGTCCAGGA
AAT
GGGGGGAGTGTGGACAGTGGTCCTGTTGGTAAGCCCGCTGATCGACACTTGAGTCTCTCTTTTCTGG
CT
GAAGAGAGTCCAGATGATAAAATGGAGGATGAAGAGGTAAACCTGAAAGTGATGGTGCTTGTGGTCCC
T
ATATTTCTTGTCGTTTTACTGTGCTGTCTAATGCTGATCGCCTACCTCTGGTCTGAAGTACAAGAAGTA
GTA
TCTCCACCGAGTTCATCAGAGTCTTCGTCTTCATCATCCTGGTCAGACTCTGACTCTCAGTGA


Translation (791 aa):
MSVAAAGRGFASSLSSPQIRRIALKEAKLTPHIWAALHWNLGLRLVPSVRVGILVLLIFLPSTFCDIGSV
Y
NSSYETVIPERLPGKGGKDPGGKVSYMLLMQGQKQLLHLEVKGHYPENNFPVYSYHNGILRQEMPLLSQ
D
CHYEGYMEGVPGSFVSVNICSGLRGVLIKEETSYGIEPMLSSKNFEHVLYTMEHQPVVSCSVTPKDSPG
D
TSHPPRSRKPDDLLVLTDWWSHTKYVEMFVVVNHQRFQMWGSNINETVQAVMDIIALANSFTRGINTEV
V
LVGLEIWTEGDPIEVPVDLQTTLRNFNFWRQEKLVGRVRHDVAHLIVGHRPGENEGQAFLRGACSGEFA
A
AVEAFHHEDVLLFAALMAHELGHNLGIQHDHPTCTCGPKHFCLMGEKIGKDSGFSNCSSDHFLRFLHDH
R
GACLLDEPGRQSRMRRAANCGNGVVEDLEECDCGSDCDSHPCCSPTCTLKEGAQCSEGLCCYNCTFKKK
G
SLCRPAEDVCDLPEYCDGSTQECPANSYMQDGTQCDRIYYCLGGWCKNPDKQCSRIYGYPARSAPEECY
I
SVNTKANRFGNCGHPTSANFRYETCSDEDVFCGKLVCTDVRYLPKVKPLHSLLQVPYGEDWCWSMDAYN
I
TDVPDDGDVQSGTFCAPNKVCMEYICTGRGVLQYNCEPQEMCHGNGVCNNFKHCHCDAGFAPPDCSSPG
N
GGSVDSGPVGKPADRHLSLSFLAEESPDDKMEDEEVNLKVMVLVVPIFLVVLLCCLMLIAYLWSEVQEV
V
SPPSSSESSSSSSWSDSDSQ




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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