NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7156.1 Public Homo sapiens 10 MKX 24 110 108 CCDS HistoryNCBI Gene:283078Re-query CCDS DB by CCDS ID:7156.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375790.9 ENSP00000364946.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375790.9Link to Ensembl Protein Viewer:ENSP00000364946.4Re-query CCDS DB by Nucleotide ID:ENST00000375790Re-query CCDS DB by Protein ID:ENSP00000364946
Original member Current member EBI ENST00000419761.6 ENSP00000400896.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000419761.6Link to Ensembl Protein Viewer:ENSP00000400896.1Re-query CCDS DB by Nucleotide ID:ENST00000419761Re-query CCDS DB by Protein ID:ENSP00000400896
Original member Current member NCBI NM_001242702.2 NP_001229631.1 Accepted alive Link to Nucleotide Sequence:NM_001242702.2Link to Protein Sequence:NP_001229631.1Re-query CCDS DB by Nucleotide ID:NM_001242702Re-query CCDS DB by Protein ID:NP_001229631Link to BLAST:NP_001229631.1
Original member Current member NCBI NM_173576.3 NP_775847.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173576.3Link to Protein Sequence:NP_775847.2Re-query CCDS DB by Nucleotide ID:NM_173576Re-query CCDS DB by Protein ID:NP_775847Link to BLAST:NP_775847.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229631.1 352 Q8IYA7 352 100% 0 0
NP_775847.2 352 Q8IYA7 352 100% 0 0

Chromosomal Locations for CCDS 7156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 27675229 27675415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27675521 27675554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27734456 27734791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27735221 27735374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27741345 27741504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 27743228 27743415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGAACACCATCGTCTTCAACAAGCTCAGCGGTGCGGTGCTGTTTGAGGACGGAGGCGCCTCGGAGCGGG
AGCGGGGTGGCCGGCCCTACAGCGGTGTCCTGGACAGTCCTCACGCCCGCCCCGAGGTGGGCATTCCCGA
CGGCCCGCCCCTCAAGGACAACCTCGGCCTGAGACACCGGAGGACCGGCGCCCGGCAGAATGGCGGGAAG
GTGAGGCACAAGCGGCAGGCCCTGCAAGACATGGCGCGACCCCTCAAGCAGTGGCTTTACAAGCACCGTG
ACAACCCGTACCCCACCAAGACCGAGAAGATACTCTTGGCCCTCGGCTCGCAGATGACGCTAGTGCAGGT
GTCAAATTGGTTTGCTAATGCAAGACGTCGGCTTAAGAATACCGTTCGACAGCCAGATTTAAGCTGGGCT
TTGAGAATAAAGTTATACAACAAGTATGTTCAAGGCAATGCTGAACGGCTTAGCGTAAGCAGTGATGACT
CATGTTCTGAAGATGGAGAAAATCCTCCAAGAACCCACATGAACGAAGGGGGCTATAATACCCCAGTTCA
CCATCCTGTGATTAAAAGTGAGAATTCGGTCATCAAAGCGGGAGTGAGGCCAGAGTCACGGGCCAGTGAG
GACTACGTGGCACCCCCCAAATACAAGAGCAGCTTGTTGAACCGTTACCTTAATGACTCTTTGAGACATG
TCATGGCCACGAACACTACCATGATGGGAAAAACAAGGCAAAGAAACCACTCGGGATCTTTTAGCTCCAA
TGAATTTGAGGAAGAATTAGTGTCTCCATCGTCATCAGAAACTGAAGGCAACTTTGTCTATCGCACAGAC
ACTCTGGAAAACGGATCCAATAAGGGTGAAAGCGCAGCTAACAGAAAAGGACCAAGCAAGGATGACACGT
ATTGGAAGGAGATCAACGCAGCTATGGCCTTAACAAATCTTGCACAGGGAAAGGACAAACTGCAGGGAAC
TACCAGCTGCATCATCCAGAAGTCGTCCCATATAGCAGAAGTAAAGACTGTCAAAGTGCCGCTGGTGCAG
CAGTTTTAA

Translation (352 aa):
MNTIVFNKLSGAVLFEDGGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGK
VRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVRQPDLSWA
LRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRTHMNEGGYNTPVHHPVIKSENSVIKAGVRPESRASE
DYVAPPKYKSSLLNRYLNDSLRHVMATNTTMMGKTRQRNHSGSFSSNEFEEELVSPSSSETEGNFVYRTD
TLENGSNKGESAANRKGPSKDDTYWKEINAAMALTNLAQGKDKLQGTTSCIIQKSSHIAEVKTVKVPLVQ
QF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH