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Report for CCDS50765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50765.1 Public Mus musculus 2 Actl10 23 108 98 CCDS HistoryNCBI Gene:70362Re-query CCDS DB by CCDS ID:50765.1Re-query CCDS DB by GeneID:70362See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 50765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000104928.1 ENSMUSP00000100532.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000104928.1Link to Ensembl Protein Viewer:ENSMUSP00000100532.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000104928Re-query CCDS DB by Protein ID:ENSMUSP00000100532
Original member NCBI NM_001171640.1 NP_001165111.1 Updated not alive Link to Nucleotide Sequence:NM_001171640.1Link to Protein Sequence:NP_001165111.1Re-query CCDS DB by Nucleotide ID:NM_001171640Re-query CCDS DB by Protein ID:NP_001165111
Current member NCBI NM_001171640.2 NP_001165111.1 Accepted alive Link to Nucleotide Sequence:NM_001171640.2Link to Protein Sequence:NP_001165111.1Re-query CCDS DB by Nucleotide ID:NM_001171640Re-query CCDS DB by Protein ID:NP_001165111Link to BLAST:NP_001165111.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165111.1 346 A2AKE7 346 100% 0 0

Chromosomal Locations for CCDS 50765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 154552130 154553170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGAAGCCGCGCATTGTGCTGAAGAGCTCAAGTCTGATGCCCAGTTGGGACCGGCCTGTGCTGCCAGGAG
CACCAGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGAGTAGTGGTGGACTG
GGACGCACTGGAGGGACTGTGGGAGCGCCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCT
GTGCTGGTGAGCGACTCACCATCAGCACCACCCAAGGGCCGAGAGAAGGTGGCTGAGCTGCTGTTCGAGG
CCCTAACAGTGCCTGCGTGCCACATGGCCAACACAGCGCTGCTGGCACTCTGCTCCATAGGAGCTTTCAG
TGGGCTGGCTGTGGAGGCGGGCGCGGGCGTGTGCCACGCCACACCCATCTACGCGGGTCACTCATGGCAC
AAGGCCACCTTCCGTCTGAATGTGGCAGGCAGTACCCTGTCGCGCTACTTTCGAGATTTGCTAGTGGCAG
CATGCCCAGATCTTCAGCTGCAGGGCCTGTCCCGCAAGACCGTTACACAGCTCAAGAAGCGCTGCTGCTA
TGTGTCGCTAGATTTCCAGGGTGATATCTGTGACCCTGCCCGCCACCAGAGGGCCTGTTTTTGCCTGGGC
AATGGCTGCTACGTGCGCCTCGGCAGCGAGCGCTTCCGCTGCCCTGAACCCATCTTCCAGCCAAGTCTCC
TAGGCCACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCG
GACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTTCCACCCTTTTCCCTGGCTTTGTGGAGCGCATG
AACCTGGAGCTGGAGGCACAGTGCCGGAGGCATGGGTACCCGGCCCTGCAGCCCTGTCTGGTGGCTCATC
CCGGGCGGGACACAGCTGTGTGGACTGGAGGATCCATGATGGCATCCTTGAACTCCTTTCAGTGCCGCTG
GATGACTCGGGCCATGTACCAGGAACACGGCCCTTTGCTGGTGCGAGATGTATTCGATTGA

Translation (346 aa):
MKPRIVLKSSSLMPSWDRPVLPGAPGCELAGGVARAHPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWP
VLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWH
KATFRLNVAGSTLSRYFRDLLVAACPDLQLQGLSRKTVTQLKKRCCYVSLDFQGDICDPARHQRACFCLG
NGCYVRLGSERFRCPEPIFQPSLLGHPEPGLPTLAFQALQKIPTTLRTRLANTVVLAGGSTLFPGFVERM
NLELEAQCRRHGYPALQPCLVAHPGRDTAVWTGGSMMASLNSFQCRWMTRAMYQEHGPLLVRDVFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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