NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7774.1 Public Homo sapiens 11 OR10A4 24 110 108 CCDS HistoryNCBI Gene:283297Re-query CCDS DB by CCDS ID:7774.1Re-query CCDS DB by GeneID:283297See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379829.2 ENSP00000369157.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379829.2Link to Ensembl Protein Viewer:ENSP00000369157.2Re-query CCDS DB by Nucleotide ID:ENST00000379829Re-query CCDS DB by Protein ID:ENSP00000369157
Original member Current member NCBI NM_207186.2 NP_997069.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207186.2Link to Protein Sequence:NP_997069.2Re-query CCDS DB by Nucleotide ID:NM_207186Re-query CCDS DB by Protein ID:NP_997069Link to BLAST:NP_997069.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997069.2 315 Q9H209 315 100% 0 0

Chromosomal Locations for CCDS 7774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6876648 6877595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGATGTGGGAAAACTGGACAATTGTCAGTGAATTTGTTCTCGTGAGCTTCTCAGCCCTGTCCACTGAGC
TTCAGGCTCTACTGTTTCTCCTTTTCTTGACCATTTACTTGGTTACTTTAATGGGCAATGTCCTCATCAT
CCTGGTCACTATAGCTGACTCTGCACTACAAAGTCCTATGTACTTCTTCCTCAGAAACTTGTCCTTCCTG
GAGATAGGTTTCAACTTGGTCATTGTGCCCAAGATGCTGGGGACCCTGATCATTCAAGACACAACCATCT
CCTTCCTTGGATGTGCCACTCAGATGTATTTCTTCTTCTTTTTTGGGGCTGCTGAGTGCTGCCTCCTGGC
CACCATGGCATATGACCGCTACGTGGCCATCTGTGACCCCTTGCACTACCCAGTCATCATGGGCCACATA
TCCTGTGCCCAGCTGGCAGCTGCCTCTTGGTTCTCAGGGTTTTCAGTGGCCACTGTGCAAACCACATGGA
TTTTCAGTTTCCCTTTTTGTGGCCCCAACAGGGTGAACCACTTCTTCTGTGACAGCCCTCCTGTTATTGC
ACTGGTCTGTGCTGACACCTCTGTGTTTGAACTGGAGGCTCTGACAGCCACTGTCCTATTCATTCTCTTT
CCTTTCTTGCTGATCCTGGGATCCTATGTCCGCATCCTCTCCACTATCTTCAGGATGCCGTCAGCTGAGG
GGAAACATCAGGCATTCTCCACCTGTTCCGCCCACCTCTTGGTTGTCTCTCTCTTCTATAGCACTGCCAT
CCTCACGTATTTCCGACCCCAATCCAGTGCCTCTTCTGAGAGCAAGAAGCTGCTGTCACTCTCTTCCACA
GTGGTGACTCCCATGTTGAACCCCATCATCTACAGCTCAAGGAATAAAGAAGTGAAGGCTGCACTGAAGC
GGCTTATCCACAGGACCCTGGGCTCTCAGAAACTATGA

Translation (315 aa):
MMWENWTIVSEFVLVSFSALSTELQALLFLLFLTIYLVTLMGNVLIILVTIADSALQSPMYFFLRNLSFL
EIGFNLVIVPKMLGTLIIQDTTISFLGCATQMYFFFFFGAAECCLLATMAYDRYVAICDPLHYPVIMGHI
SCAQLAAASWFSGFSVATVQTTWIFSFPFCGPNRVNHFFCDSPPVIALVCADTSVFELEALTATVLFILF
PFLLILGSYVRILSTIFRMPSAEGKHQAFSTCSAHLLVVSLFYSTAILTYFRPQSSASSESKKLLSLSST
VVTPMLNPIIYSSRNKEVKAALKRLIHRTLGSQKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH