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Report for CCDS33131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33131.1 Public Homo sapiens 19 ZNF547 24 110 108 CCDS HistoryNCBI Gene:284306Re-query CCDS DB by CCDS ID:33131.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282282.4 ENSP00000282282.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282282.4Link to Ensembl Protein Viewer:ENSP00000282282.3Re-query CCDS DB by Nucleotide ID:ENST00000282282Re-query CCDS DB by Protein ID:ENSP00000282282
Original member Current member NCBI NM_173631.4 NP_775902.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173631.4Link to Protein Sequence:NP_775902.2Re-query CCDS DB by Nucleotide ID:NM_173631Re-query CCDS DB by Protein ID:NP_775902Link to BLAST:NP_775902.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775902.2 402 Q8IVP9-1 402 100% 0 0

Chromosomal Locations for CCDS 33131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57368556 57368579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57371782 57371908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57377128 57378185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGGCAGAAATGAACCCTGCACAGGGTCATGTGGTTTTTGAAGACGTGGCCATATATTTCTCCCAGGAGG
AG
TGGGGGCATCTCGATGAGGCTCAGAGATTGCTGTACCGTGATGTGATGCTGGAGAATTTGGCCCTTTT
G
TCCTCACTAGGTTGTTGCCATGGAGCTGAGGATGAGGAGGCACCTTTAGAGCCAGGTGTTTCTGTAGGA
GTG
TCACAGGTCATGGCTCCAAAGCCCTGTCTATCTACCCAGAATACCCAGCCCTGTGAGACATGTAGCT
CA
CTTCTGAAGGACATTCTGCGTCTGGCTGAGCATGACGGAACACACCCCGAGCAGGGACTGTACACGTG
T
CCAGCACATCTTCACCAGCACCAAAAGGAGCAGATTAGAGAGAAACTTTCTAGAGGGGATGGAGGAAGA
CCG
ACATTTGTGAAGAACCACAGAGTTCACATGGCAGGGAAGACCTTCTTGTGCAGTGAATGTGGGAAAG
CC
TTTAGCCACAAACATAAACTTTCTGACCATCAGAAAATCCACACTGGAGAAAGAACTTATAAGTGCAG
C
AAATGTGGGATATTGTTTATGGAAAGGTCCACACTCAATAGACATCAGAGAACTCACACTGGAGAAAGG
CCT
TATGAGTGCAATGAATGTGGGAAAGCCTTTCTTTGTAAGTCTCACCTTGTTCGTCACCAGACAATCC
AC
TCTGGAGAAAGGCCTTATGAGTGCAGTGAATGTGGGAAATTGTTTATGTGGAGTTCCACACTCATTAC
A
CATCAGAGGGTTCACACTGGAAAGAGGCCTTATGGTTGCAGTGAATGTGGGAAGTTCTTTAAGTGCAAC
TCA
AACCTCTTTAGGCATTACAGAATTCATACAGGAAAAAGGTCTTATGGTTGCAGTGAATGTGGGAAAT
TC
TTTATGGAAAGGTCTACACTCAGTAGACATCAGAGAGTTCACACTGGAGAAAGGCCTTATGAGTGCAA
T
GAATGTGGGAAATTCTTCAGCTTGAAATCCGTCCTCATTCAACACCAAAGAGTTCACACTGGAGAACGG
CCT
TATGAATGCAGTGAGTGTGGGAAGGCCTTCCTTACAAAGTCCCACCTCATTTGTCATCAGACAGTTC
AC
ACTGCAGCAAAGCAGTGCAGTGAATGTGGGAAATTCTTTAGGTATAACTCTACACTTCTCAGACATCA
G
AAAGTCCACACTGGATAA


Translation (402 aa):
MAEMNPAQGHVVFEDVAIYFSQEEWGHLDEAQRLLYRDVMLENLALLSSLGCCHGAEDEEAPLEPGVSVG
V
SQVMAPKPCLSTQNTQPCETCSSLLKDILRLAEHDGTHPEQGLYTCPAHLHQHQKEQIREKLSRGDGGR
P
TFVKNHRVHMAGKTFLCSECGKAFSHKHKLSDHQKIHTGERTYKCSKCGILFMERSTLNRHQRTHTGER
P
YECNECGKAFLCKSHLVRHQTIHSGERPYECSECGKLFMWSSTLITHQRVHTGKRPYGCSECGKFFKCN
S
NLFRHYRIHTGKRSYGCSECGKFFMERSTLSRHQRVHTGERPYECNECGKFFSLKSVLIQHQRVHTGER
P
YECSECGKAFLTKSHLICHQTVHTAAKQCSECGKFFRYNSTLLRHQKVHTG




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser