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Report for CCDS56971.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56971.1 Public Mus musculus 14 Epsti1 23 108 98 CCDS HistoryNCBI Gene:108670Re-query CCDS DB by CCDS ID:56971.1Re-query CCDS DB by GeneID:108670See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56971.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022591.15 ENSMUSP00000022591.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022591.15Link to Ensembl Protein Viewer:ENSMUSP00000022591.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022591Re-query CCDS DB by Protein ID:ENSMUSP00000022591
Original member Current member NCBI NM_029495.2 NP_083771.1 Accepted alive Link to Nucleotide Sequence:NM_029495.2Link to Protein Sequence:NP_083771.1Re-query CCDS DB by Nucleotide ID:NM_029495Re-query CCDS DB by Protein ID:NP_083771Link to BLAST:NP_083771.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083771.1 314 Q8VDI1-1 314 99.6815% 0 1

Chromosomal Locations for CCDS 56971.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77904486 77904664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77927170 77927228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77928747 77928830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77931247 77931320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77932148 77932231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77939862 77939935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77963632 77963725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77972578 77972610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77974517 77974597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77986692 77986765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77994532 77994631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 78001971 78001979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGTACACCCGCAGTAAGGTGGTGGGCCCAGGCTTGGGCACTTCCTCCATCTCTCGGGACCACGCTGGAG
CTGGGCAGCGCAGGGAGCTGGGCTTGCAGCAAAACCGGAGACAGAGTTTGGAGGTGGCAGCTCCCGAGGG
CCCCAAGATGGAGAGGCAGGGGCATGCTGACCAGGGAAGCGCAGGCACATACACCCTGATAGCACCAAAC
GAGAGCAGAAGGCAGAAGATACAGAGAATTGCTGAGCAAGAACTGGCAGACCTGGAGAGATGGAAGCAAC
AGAACAGGGCAAAACCAGTCTACTTGGTGCCACAACGGCTGGGTGGAAGCCAGTCTGAGGCTGAAGTCAG
ACAGAAACAACAGCTGCAACAGATGCGTTCTAAATACCAGCAAAAGCTCAAGAGGGATGAATCTATTCGA
ATCAGGAAGGAAGCTGAGGAAGCCAAGTTCCAAAAAATGAAAGCAATCCAGAGGGAGAAGAGTAATAAAC
TAGAGGAGAAAAAGCAACTTCAAGAAGACATCAGAAGAGCCACATTTCGAGAGCATCATCAGTCCAAAAC
GGCTGAGCTCTTGAGCAGACTGGACACAGAGCGGAGAAACAGAAGTGCCTGTCTGATTGCTCCTCCTGCC
ACCCAGTCCTCGAGATGGAAACTTCCAGTCCTGCTTAGAGATCCCAGCTGGGCCGGCAGCCAAGCACACA
GGGATTCTCCGCAGAAGGAAGACAACCCCAGGCTGCAAAAGACGAGGGATGGACATCAGAAGAATAAATT
ACTGGAAACTAAAGGACAGCACCAGGAGGAAGAAAGAGCCCAAATCCATCAAGCTGAACACTGGAGGGTA
AATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAGTCTGGAGGCTGTT
GCAATATGAATAGTACTGACAGCTGGGGTATATGA

Translation (314 aa):
MYTRSKVVGPGLGTSSISRDHAGAGQRRELGLQQNRRQSLEVAAPEGPKMERQGHADQGSAGTYTLIAPN
ESRRQKIQRIAEQELADLERWKQQNRAKPVYLVPQRLGGSQSEAEVRQKQQLQQMRSKYQQKLKRDESIR
IRKEAEEAKFQKMKAIQREKSNKLEEKKQLQEDIRRATFREHHQSKTAELLSRLDTERRNRSACLIAPPA
TQSSRWKLPVLLRDPSWAGSQAHRDSPQKEDNPRLQKTRDGHQKNKLLETKGQHQEEERAQIHQAEHWRV
NNAFLDRLQGKSQPGGLEQSGGCCNMNSTDSWGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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