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Report for CCDS39032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39032.1 Public Mus musculus 5 Rheb 23 108 98 CCDS HistoryNCBI Gene:19744Re-query CCDS DB by CCDS ID:39032.1Re-query CCDS DB by GeneID:19744See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 39032.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030787.8 ENSMUSP00000030787.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030787.8Link to Ensembl Protein Viewer:ENSMUSP00000030787.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000030787Re-query CCDS DB by Protein ID:ENSMUSP00000030787
Original member Current member NCBI NM_053075.3 NP_444305.2 Accepted alive Link to Nucleotide Sequence:NM_053075.3Link to Protein Sequence:NP_444305.2Re-query CCDS DB by Nucleotide ID:NM_053075Re-query CCDS DB by Protein ID:NP_444305Link to BLAST:NP_444305.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444305.2 184 Q921J2 184 100% 0 0

Chromosomal Locations for CCDS 39032.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 24803664 24803756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24806999 24807080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24807605 24807652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24807748 24807804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24808353 24808435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24813798 24813865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24817760 24817831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24842185 24842236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGCCTCAGTCCAAGTCCCGGAAGATCGCCATCCTGGGCTACCGGTCTGTGGGAAAGTCCTCATTGACAA
TTCAGTTTGTTGAAGGCCAATTTGTTGATTCCTACGATCCAACCATAGAGAACACGTTCACCAAGTTGAT
CACGGTAAATGGTCAAGAGTATCATCTTCAGCTTGTAGACACAGCGGGGCAGGATGAATATTCCATTTTT
CCTCAGACATACTCCATAGATATTAATGGTTATATTCTTGTGTATTCTGTTACATCAATCAAAAGTTTTG
AAGTAATTAAAGTTATCCATGGCAAGTTGTTGGATATGGTGGGGAAAGTGCAGATACCTATTATGTTGGT
TGGAAATAAGAAGGACCTGCATATGGAAAGGGTGATCAGCTATGAAGAAGGAAAGGCTTTGGCAGAATCT
TGGAATGCAGCTTTTTTGGAATCTTCTGCTAAAGAAAATCAAACTGCTGTTGATGTTTTTAAAAGGATAA
TTTTGGAAGCAGAAAAGATTGATGGAGCAGCTTCACAAGGAAAGTCTTCGTGCTCGGTGATGTGA

Translation (184 aa):
MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIF
PQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAES
WNAAFLESSAKENQTAVDVFKRIILEAEKIDGAASQGKSSCSVM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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