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Report for CCDS35094.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35094.2 Public Homo sapiens 9 OR13D1 24 110 108 CCDS HistoryNCBI Gene:286365Re-query CCDS DB by CCDS ID:35094.2See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35094.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641530.1 ENSP00000493337.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641530.1Link to Ensembl Protein Viewer:ENSP00000493337.1Re-query CCDS DB by Nucleotide ID:ENST00000641530Re-query CCDS DB by Protein ID:ENSP00000493337
Original member Current member NCBI NM_001004484.2 NP_001004484.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004484.2Link to Protein Sequence:NP_001004484.2Re-query CCDS DB by Nucleotide ID:NM_001004484Re-query CCDS DB by Protein ID:NP_001004484Link to BLAST:NP_001004484.2

Chromosomal Locations for CCDS 35094.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 104694518 104695462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAGACAAGAAATTACTCTGCCATGACTGAATTCTTTCTGGTGGGGCTTTCCCAATATCCAGAGCTCC
AGCTTTTTCTGTTCCTGCTCTGCCTCATCATGTACATGATAATCCTCCTGGGAAATAGCCTCCTCATTAT
CATCACCATCTTGGATTCTCGCCTCCATACTCCCATGTATTTCTTTCTTGGAAACCTCTCATTCTTGGAC
ATCTGTTACACATCCTCATCCATTCCTCCAATGCTTATTATATTTATGTCTGAGAGAAAATCCATCTCCT
TCATTGGCTGTGCTCTGCAGATGGTTGTGTCCCTTGGCTTGGGCTCCACTGAGTGTGTCCTCCTGGCTGT
GATGGCCTATGACCACTATGTGGCCATCTGCAACCCACTGAGGTACTCCATCATCATGAACGGAGTGCTG
TATGTGCAAATGGCTGCATGGTCCTGGATCATAGGCTGTCTGACCTCCCTATTGCAAACAGTTCTGACAA
TGATGTTGCCTTTCTGTGGGAATAATGTCATTGATCATATTACCTGTGAAATTTTGGCCCTTCTAAAACT
TGTTTGTTCAGATATCACCATCAATGTGCTTATCATGACAGTGACAAATATTGTTTCACTGGTGATTCTT
CTACTGTTAATTTTCATCTCCTATGTGTTTATTCTCTCTTCCATCCTGAGAATTAATTGTGCTGAGGGAA
GAAAGAAAGCCTTCTCTACCTGTTCAGCGCACTCGATTGTGGTCATCTTATTCTACGGTTCAGCCCTTTT
TATGTACATGAAACCCAAGTCAAAGAACACTAATACATCTGATGAGATTATTGGGCTGTCTTATGGAGTG
GTAAGCCCAATGTTAAATCCCATCATCTATAGCCTCAGGAATAAAGAGGTCAAAGAGGCTGTAAAGAAAG
TCCTGAGCAGACATCTGCATTTATTGAAAATGTGA

Translation (314 aa):
METRNYSAMTEFFLVGLSQYPELQLFLFLLCLIMYMIILLGNSLLIIITILDSRLHTPMYFFLGNLSFLD
ICYTSSSIPPMLIIFMSERKSISFIGCALQMVVSLGLGSTECVLLAVMAYDHYVAICNPLRYSIIMNGVL
YVQMAAWSWIIGCLTSLLQTVLTMMLPFCGNNVIDHITCEILALLKLVCSDITINVLIMTVTNIVSLVIL
LLLIFISYVFILSSILRINCAEGRKKAFSTCSAHSIVVILFYGSALFMYMKPKSKNTNTSDEIIGLSYGV
VSPMLNPIIYSLRNKEVKEAVKKVLSRHLHLLKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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