NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36367.1 Public Mus musculus 11 Kif19a 23 108 98 CCDS HistoryNCBI Gene:286942Re-query CCDS DB by CCDS ID:36367.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36367.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084368.11 ENSMUSP00000081398.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084368.11Link to Ensembl Protein Viewer:ENSMUSP00000081398.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000084368Re-query CCDS DB by Protein ID:ENSMUSP00000081398
Original member NCBI NM_001102615.1 NP_001096085.1 Updated not alive Link to Nucleotide Sequence:NM_001102615.1Link to Protein Sequence:NP_001096085.1Re-query CCDS DB by Nucleotide ID:NM_001102615Re-query CCDS DB by Protein ID:NP_001096085
Current member NCBI NM_001102615.2 NP_001096085.1 Accepted alive Link to Nucleotide Sequence:NM_001102615.2Link to Protein Sequence:NP_001096085.1Re-query CCDS DB by Nucleotide ID:NM_001102615Re-query CCDS DB by Protein ID:NP_001096085Link to BLAST:NP_001096085.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096085.1 997 Q99PT9 997 100% 0 0

Chromosomal Locations for CCDS 36367.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 114765514 114765552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114767156 114767236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114778354 114778464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114779212 114779299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114779585 114779721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114780753 114780878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114781171 114781365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114781804 114781950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114782979 114783101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114784751 114784916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114785435 114785609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114785735 114785930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114786376 114786646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114786732 114786853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114787500 114787633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114787828 114787933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114788074 114788161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114789144 114789541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114789759 114789918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114790131 114790261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2994 nt):
ATGAAGGACAGCGGTGACTCAAAGGACCAGCAACTCATGGTGGCACTTAGGGTCCGGCCCATCAGCGTGG
CTGAGCTGGAGGAGGGAGCTACCCTCATCGCTCACAAGATGGACGAGCAGATGGTGGTTCTCATGGACCC
AATGGAGGACCCTGACGACATTCTGCGGGCACACCGGTCCCGGGAGAAGTCATACCTCTTTGACGTGGCC
TTTGACTTCACTGCCACCCAGGAGATGGTATATCAGGCCACCACCAAGAGCCTCATCGAGGGCGTCATCT
CAGGGTACAATGCCACTGTGTTTGCCTATGGCCCTACAGGCTGTGGGAAGACCTACACCATGCTGGGCAC
TGACCACGAGCCAGGCATCTATGTTCGGACCCTCAATGACCTGTTCCGAGCCATCGAGGAGACCAGCAAT
GACATGGAATATGAGGTGTCCATGTCCTACCTGGAGATCTACAATGAGATGATCCGGGACCTACTGAACC
CGGCCCTGGGGTACCTGGAGCTGAGGGAAGACTCCAAAGGGGTGATCCAGGTGGCCGGGATCACCGAAGT
GTCTACCATCAATGCGAAGGAGATCATGCAGCTGCTGATGAAGGGGAACCGGCAGAGGACGCAAGAGCCC
ACAGCTGCCAACCAGACATCCTCCCGCTCCCACGCCGTGCTCCAGGTGGCCGTGCGTCAGCGCAGCCGGG
TCAAGAACATCCTCCAGGAGGTGCGGCAGGGCCGCCTGTTTATGATTGACCTAGCTGGCTCCGAGCGTGC
CTCTCAGACACAGAACCGGGGGCAGCGCATGAAGGAAGGAGCCCACATCAACCGCTCTCTGCTGGCCCTG
GGCAACTGCATCAATGCGCTGAGTGACAAGGGCAGTAATAAATACATCAACTATCGGGACAGCAAACTCA
CCCGGCTCCTGAAGGATTCACTAGGCGGGAACAGCCGCACTGTGATGATTGCCCACATCAGTCCAGCGAG
CACTGCCTTTGAAGAGTCCCGGAACACCCTGACCTACGCCGGCCGAGCCAAGAATATTAGGACTCGGGTG
AAGCAGAACCTGCTCAACGTCTCCTACCACATCGCTCAGTACACCAGCATCATCGCTGATCTGAGAGGCG
AGATCCAGAGACTCAAGTGCAAGATCGACCAGCAGGCTGGGCGGGGTCAGGCCCGGGGCAAACTGGACAG
GGGTGACATCCGCCACATCCAAGCTGAGGTTCAGCTACACAGCGGGCAGGAAGGGCCCGCGGAGATGGGA
CAGCTTCGGGAGCAACTCATCAGCGCCTTCCACGAGCAGATGGATGTGCGCCGGCGCCTGCTGGAGCTGG
AGAACCAGGCCATGGAAGTCCAGATTGACACCTCCCGTCACCTCCTCACCATCGCCGGCTGGGAGCACGA
GAAGTCACGAAGGGCTCTCAAGTGGCGGGAGGAGCGAAGGAAGGAGTCCTACACCAAAGAGGACAGTGAG
AAGGACTCGGACACAGGCGATGAGCCAGATAACCTGGAGCCACCTGAAGTGGCATCAGCCCGTGAAAACA
TCGCTGCCCTGGTGGGCGAACAGAAGAAGTTGCGCAAAGAGAAGCTGGCGCTGGAGCAGCGCTGCCGAGA
GCTGCGTGCGCGTGGCCGGCGCCTGGAAGAGACGCTGCCGCGCCGCATCGGCTCGGAGGAGCAGCGCGAG
GTGCTCAGCCTGCTGTGCCGCGTGCACGAGCTGGAGGTGGAAAACACCGAGATGCAGTCGCACGCTCTGC
TCCGCGACAGCGCTCTGCGCCACCGCCGCGAGGCTGTGCGCCGCCTGGAGCAGCACCGCAGCCTCTGCGA
TGAGATCATCCAGGGCCAGCGGCAGATCATCGACGACTACAATCTGGAGGTTCCCCGGCACCTGGAGGAA
CTCTACGAAGTCTACCTTCGGGAACTGGAAGAGGGCAGCCTGGAGCGGGCCACCATCATGGACCGAGTGG
CCTCCAGAGCCCTGCAGGACAGCTCCTTGCCCAAAATCACTCCAGCAGGGGCCACACTGACCCCAGACTC
TGACCTGGAGAGTGTGAAGACGCTAAGTTCTGAGGCCCAGCGCCCCCAAAACAACACCCTACCCCCACTT
GGCACAGACAGTGAGTCCTACCATGTGTTCAAGGCCAGTCCCAGGGCCTGGCAGGTGAAGAGCTCCTCTG
TGCCTACTCCGCCCCCCATCCAGGTGGGCAGCCTGGTGACCCAGGAGGCCCCACCACAGGACAGCCTGGG
CAGCCAGATCAACTCTTCCCCGGAGAGCAGCGAGAACCTGTCAGAGATCCTTCTGTCCCATAAAGAGAGG
AAAGAGATCCTGACGCGGACCAAGTGTATCTCGGTGAAGGCCGCCCAGCGGCGCTCCCGGGCCCTGGGAA
CGGAAGGGCGCCACCTGCTGGCACCTGCCACAGAGCGCAGCAGCCTATCCCTGCACTCGTTGAGCGAGGC
TGATGATGCTCGCCCACCCGGGCAACTGGCCTGCAAGCGGCCGCCCAGCCCGACACTGCAGCATGCCATC
AGCGAGGACAATCTATCTAGCAGCACAGGCGAGGGCCCCTCCAGGGCGGTAGGACCTCGAGGTGATGGCA
CTGGGTCCTGGGTGCGTGGCCAGAAGAAATGCCTCAGCAAAAAAAGGGAGGAGTCACTGGAAGCGAAGAG
GAGGAAGCGGAGGTCTCGGTCCTTTGAGGTCACAGGACAAGGGCTGTCCCGTCCCAAGACACACCTACTG
GGACCTCGTCCCTCCGAGGGCCTTTCAGATCGCCGGATGCCGGCGTGTGGGCGGCCATCTCCTGGTGTCA
GGCATCTGGGAAAAGTCTCTCTGCCTCTGGCCAAGGTCAAATTTCCTCCAAACCAGAACACAGGATCTGG
AAACCCTTCACCCCTTCTTGTTGCCCCCAACCAAGCCGGTGTTTCCCGTAGAGCTACACGTGGGCCCAGC
CTACCCCATGGCTCAAGCACCTTTGGCAAAGATGGACGCCTCCAGCATAACTGA

Translation (997 aa):
MKDSGDSKDQQLMVALRVRPISVAELEEGATLIAHKMDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVA
FDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAIEETSN
DMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEP
TAANQTSSRSHAVLQVAVRQRSRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLAL
GNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASTAFEESRNTLTYAGRAKNIRTRV
KQNLLNVSYHIAQYTSIIADLRGEIQRLKCKIDQQAGRGQARGKLDRGDIRHIQAEVQLHSGQEGPAEMG
QLREQLISAFHEQMDVRRRLLELENQAMEVQIDTSRHLLTIAGWEHEKSRRALKWREERRKESYTKEDSE
KDSDTGDEPDNLEPPEVASARENIAALVGEQKKLRKEKLALEQRCRELRARGRRLEETLPRRIGSEEQRE
VLSLLCRVHELEVENTEMQSHALLRDSALRHRREAVRRLEQHRSLCDEIIQGQRQIIDDYNLEVPRHLEE
LYEVYLRELEEGSLERATIMDRVASRALQDSSLPKITPAGATLTPDSDLESVKTLSSEAQRPQNNTLPPL
GTDSESYHVFKASPRAWQVKSSSVPTPPPIQVGSLVTQEAPPQDSLGSQINSSPESSENLSEILLSHKER
KEILTRTKCISVKAAQRRSRALGTEGRHLLAPATERSSLSLHSLSEADDARPPGQLACKRPPSPTLQHAI
SEDNLSSSTGEGPSRAVGPRGDGTGSWVRGQKKCLSKKREESLEAKRRKRRSRSFEVTGQGLSRPKTHLL
GPRPSEGLSDRRMPACGRPSPGVRHLGKVSLPLAKVKFPPNQNTGSGNPSPLLVAPNQAGVSRRATRGPS
LPHGSSTFGKDGRLQHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH