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Report for CCDS20640.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20640.1 Public Mus musculus 6 Crebl2 23 108 98 CCDS HistoryNCBI Gene:232430Re-query CCDS DB by CCDS ID:20640.1Re-query CCDS DB by GeneID:232430See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20640.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046303.11 ENSMUSP00000035304.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046303.11Link to Ensembl Protein Viewer:ENSMUSP00000035304.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000046303Re-query CCDS DB by Protein ID:ENSMUSP00000035304
Original member Current member NCBI NM_177687.3 NP_808355.1 Accepted alive Link to Nucleotide Sequence:NM_177687.3Link to Protein Sequence:NP_808355.1Re-query CCDS DB by Nucleotide ID:NM_177687Re-query CCDS DB by Protein ID:NP_808355Link to BLAST:NP_808355.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808355.1 123 Q32M00 123 98.374% 0 2

Chromosomal Locations for CCDS 20640.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 134830430 134830444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134849103 134849300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134851080 134851224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 134852278 134852291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGGATGACAGCAAGGTGGTTGGAGGCAAAGTGAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAA
TCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCAGAGTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAG
GTACCAGTACTTGGAGGAGTTGGTATCCAGTCGGGAAAGAGCTATATGTGCACTCCGAGAGGAACTGGAA
ATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTCTGAAATAAGGGCCCTACTCACTG
GCGAGGAGCAGAGCAAGCCTCAGCAGAGCTCAAGCAGGCATCCCAAAGCTGGGAAGACAGACGCTGACAC
CAACTCGTTGGTGGGGAATTGA

Translation (123 aa):
MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRERAICALREELE
MYKQWCMAMDQGKIPSEIRALLTGEEQSKPQQSSSRHPKAGKTDADTNSLVGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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