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Report for CCDS37740.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37740.1 Public Mus musculus 18 Zfp521 23 108 98 CCDS HistoryNCBI Gene:225207Re-query CCDS DB by CCDS ID:37740.1Re-query CCDS DB by GeneID:225207See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37740.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025288.8 ENSMUSP00000025288.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025288.8Link to Ensembl Protein Viewer:ENSMUSP00000025288.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000025288Re-query CCDS DB by Protein ID:ENSMUSP00000025288
Original member Current member EBI ENSMUST00000234410.1 ENSMUSP00000157321.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234410.1Link to Ensembl Protein Viewer:ENSMUSP00000157321.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234410Re-query CCDS DB by Protein ID:ENSMUSP00000157321
Original member Current member NCBI NM_145492.4 NP_663467.1 Accepted alive Link to Nucleotide Sequence:NM_145492.4Link to Protein Sequence:NP_663467.1Re-query CCDS DB by Nucleotide ID:NM_145492Re-query CCDS DB by Protein ID:NP_663467Link to BLAST:NP_663467.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663467.1 1311 Q6KAS7-1 1311 100% 0 0

Chromosomal Locations for CCDS 37740.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 13688995 13689024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13715141 13715256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13717616 13717747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13817238 13817322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13843782 13847134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13938962 13939141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13971364 13971403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3936 nt):
ATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGACCCCAACTGTAAACTTGAAGACAAGATTG
AAGATGGGGAGGCAGTAGACTGCAAGAAGAGGCCAGAAGACGGGGAGGAGTTGGAGGAGGACGCTGTGCA
CAGCTGTGACAGCTGCCTCCAGGTGTTTGAGTCACTGAGCGACATCACAGAGCACAAGATCCATCAGTGC
CAGCTGACAGATGGCGTTGACGTTGAGGACGACCCCAGCTGCTCTTGGCCAGCCTCCTCGCCTTCCAGTA
AGGACCAGACTTCCCCCAGCCATGGAGAAGGGTGTGATTTCGGAGAGGAAGAAGGTGGCCCTGGACTGCC
TTACCCATGCCAGTTCTGTGACAAGTCCTTTAGCCGCCTCAGCTACCTAAAGCACCATGAACAGAGCCAC
AGTGACAAGCTGCCCTTCAAGTGCACCTACTGCAGTCGGCTGTTCAAACACAAGCGGAGCCGTGACCGCC
ACATAAAGCTCCACACTGGGGATAAGAAGTATCACTGTAGCGAGTGTGACGCAGCCTTCTCCCGGAGCGA
TCATCTCAAGATCCACTTAAAGACTCACACCTCCAACAAGCCATATAAATGTGCCGTCTGCCGCAGAGGG
TTCCTCTCCTCTAGCTCCTTGCACGGACATATGCAGGTTCATGAGCGGAACAAGGACGGCTCCCAGTCTG
GCTCCAGGATGGAGGACTGGAAGATGAAGGACACTCAGAAGTGCAGCCAGTGCGAGGAAGGCTTTGACTT
CCCGGAAGACCTCCAGAAGCACATTGCAGAATGCCACCCCGAGTGCTCCCCTAATGAGGACCGAGCAGCC
CTCCAGTGCATGTACTGCCACGAGCTGTTTGTGGAGGAGACGTCCCTCATGAACCACATCGAGCAGGTAC
ACGGGGGTGAGAAGAAGAACTCTTGCAGCATTTGCTCAGAGAGCTTCCTCACGGTCGAGGAGCTGTATAG
CCACATGGACAGTCACCAGCAGCCAGAGTCCTGCAATCACAGCAACAGCCCTTCCCTGGTCACTGTGGGT
TACACCTCAGTGTCCAGCACGACTCCAGACTCGAACCTCTCAGTGGACAGCTCGACCATGGTAGAGGCTG
CACCACCGATTCCAAAGAGCCGCGGGAGGAAGCGAGCTGCTCAGCAGACCTCCGATATGACTGGCCCCTC
TAGTAAGCAGGCGAAAGTCACCTACAGCTGTATTTACTGCAACAAGCAGTTATTTTCCAGTCTCGCGGTT
CTGCAGATTCACTTGAAAACTATGCATTTAGATAAGCCTGAGCAGGCTCATATCTGTCAGTATTGCTTGG
AGGTCTTACCCTCACTCTATAACCTAAATGAACATCTTAAACAAGTGCACGAAGCTCAGGACCCCGGCCT
GATTGTTTCGGCCATGCCTGCCATTGTTTACCAGTGCAACTTCTGTTCCGAAGTTGTCAATGACCTCAAC
ACCCTTCAGGAGCACATCCGATGTTCTCATGGGTTTGCCAATCCCGCGGCCAAGGACAGCAATGCGTTCT
TTTGTCCCCATTGTTACATGGGGTTTCTCACTGACTCTTCACTTGAAGAGCATATAAGACAGGTCCATTG
TGACCTCAGTGGCTCCCGGTTTGGGTCTCCTGTGCTTGGGACTCCAAAAGAACCGGTGGTTGAAGTCTAC
TCCTGTTCCTATTGTACAAATTCGCCAATATTCAACAGTGTTCTTAAACTGAATAAGCATATTAAAGAGA
ATCATAAAAACATTCCCTTGGCCCTGAATTATATTCACAATGGGAAGAAATCCCGGGCCTTGAGCCCTTT
GTCCCCTGTGGCTATAGAACAAACAACTCTTAAGATGATGCAGACTGTGGGAGGCGGGCCTGCCCGCGCC
TCTGGAGAGTATATCTGTAATCAGTGTGGTGCTAAGTACACGTCCCTAGACAGCTTTCAGACTCACCTCA
AAACCCATTTGGACACCGTGCTGCCAAAACTGACCTGCCCTCAGTGTAACAAAGAATTCCCCAACCAAGA
GTCCTTGCTAAAGCACGTGACCATCCACTTTATGATCACCTCAACCTACTACATCTGTGAGAGCTGTGAC
AAGCAGTTCACCTCCGTGGATGACCTCCAGAAGCACCTGCTGGACATGCACACCTTCGTCTTCTTCCGCT
GCACACTCTGCCAGGAAGTGTTCGACTCCAAGGTCTCTATCCAGCTGCACTTGGCCGTGAAGCACAGTAA
CGAGAAGAAGGTGTACCGCTGCACGTCCTGCAACTGGGACTTCCGCAACGAGACCGACCTGCAGCTGCAC
GTGAAGCACAACCACTTGGAGAACCAAGGCAAAGTGCACAAGTGCATCTTCTGCGGCGAGTCGTTTGGCA
CCGAGGTGGAGCTGCAGTGCCACATCACCACCCACAGCAAGAAGTACAACTGCAGGTTCTGCAGCAAAGC
CTTCCACGCCGTCATCCTGCTGGAGAAGCACCTGCGGGAGAAACACTGTGTGTTTGAAACCAAGACCCCC
AACTGTGGCACCAACGGGGCCTCGGAGCAAGTGCAGAAGGAGGAGGCTGAGCTGCAGACCTTGCTCACCA
ACAGCCAGGAGTCCCATAACAGCCATGATGGGAGTGAGGAGGACGTGGACAGCTCTGAACCCATGTATGG
CTGTGACATCTGCGGGGCGGCCTACACCATGGAGACGTTGCTGCAGAACCACCAGCTCCGAGACCACAAC
ATCAGGCCCGGAGAAAGCGCCATCGTGAAGAAGAAGGCGGAGCTCATTAAAGGGAATTACAAGTGTAACG
TTTGCTCGAGAACCTTCTTCTCCGAAAACGGGCTCCGTGAACACATGCAGACCCACTTAGGCCCGGTCAA
ACACTACATGTGCCCTATCTGTGGAGAGCGCTTCCCTTCCCTGTTAACTCTCACAGAGCACAAAGTCACA
CACAGCAAGAGCCTGGATACCGGAAACTGTCGTATTTGTAAGATGCCCCTGCAGAGCGAAGAGGAGTTTT
TGGAGCACTGCCAGATGCACCCTGACCTGAGGAATTCCCTGACTGGGTTTCGTTGTGTGGTGTGTATGCA
GACTGTGACCTCCACCTTGGAACTCAAAATCCACGGGACCTTCCACATGCAGAAGACGGGGAATGGGTCC
TCCGTGCAGACCACCGGGCGTGGCCAGCACGTTCAGAAACTGTATAAGTGCGCATCTTGCCTCAAAGAGT
TCCGTTCCAAGCAAGATCTGGTGAAACTCGACATCAACGGCCTGCCATATGGTCTGTGTGCCGGCTGTGT
GAATCTCAGTAAGAGCAGTAGCCCGGGCCTCAGTCTCCCTCCTGGTGCCAGCAGGCCAGGCTTGGGCCAG
AATGAGAGTCTGAGCGCCATGGAAGGAAAAGGCAAGGCGGGGGGACTGAAGACGCGCTGTTCAAGCTGCA
ATGTCAAGTTTGAGTCTGAAAGCGAACTGCAGAACCACATCCAGACGGTGCACCGGGAGCTTGTGCCAGA
CGCCAACAGCACACAGTTGAAAACGCCCCAAGTGTCACCCATGCCCAGAATCAGTCCCTCCCAGTCCGAT
GAGAAGAAGACCTACCAGTGTATCAAGTGTCAGATGGTTTTCTACAACGAGTGGGACATCCAGGTTCATG
TGGCAAATCACATGATTGATGAAGGGCTGAACCATGAGTGCAAACTCTGCAGCCAGACCTTTGACTCCCC
CGCCAAACTTCAGTGTCACCTGATAGAGCACAGCTTCGAAGGGATGGGTGGTACCTTCAAGTGCCCCGTC
TGTTTCACAGTGTTTGTTCAAGCTAACAAGTTGCAACAGCATATATTCTCTGCCCATGGACAAGAAGACA
AGATCTATGACTGCACACAATGCCCACAGAAGTTTTTCTTCCAAACAGAGCTACAGAATCATACGATGAC
TCAGCACAGCAGTTAG

Translation (1311 aa):
MSRRKQAKPRSLKDPNCKLEDKIEDGEAVDCKKRPEDGEELEEDAVHSCDSCLQVFESLSDITEHKIHQC
QLTDGVDVEDDPSCSWPASSPSSKDQTSPSHGEGCDFGEEEGGPGLPYPCQFCDKSFSRLSYLKHHEQSH
SDKLPFKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCSECDAAFSRSDHLKIHLKTHTSNKPYKCAVCRRG
FLSSSSLHGHMQVHERNKDGSQSGSRMEDWKMKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAA
LQCMYCHELFVEETSLMNHIEQVHGGEKKNSCSICSESFLTVEELYSHMDSHQQPESCNHSNSPSLVTVG
YTSVSSTTPDSNLSVDSSTMVEAAPPIPKSRGRKRAAQQTSDMTGPSSKQAKVTYSCIYCNKQLFSSLAV
LQIHLKTMHLDKPEQAHICQYCLEVLPSLYNLNEHLKQVHEAQDPGLIVSAMPAIVYQCNFCSEVVNDLN
TLQEHIRCSHGFANPAAKDSNAFFCPHCYMGFLTDSSLEEHIRQVHCDLSGSRFGSPVLGTPKEPVVEVY
SCSYCTNSPIFNSVLKLNKHIKENHKNIPLALNYIHNGKKSRALSPLSPVAIEQTTLKMMQTVGGGPARA
SGEYICNQCGAKYTSLDSFQTHLKTHLDTVLPKLTCPQCNKEFPNQESLLKHVTIHFMITSTYYICESCD
KQFTSVDDLQKHLLDMHTFVFFRCTLCQEVFDSKVSIQLHLAVKHSNEKKVYRCTSCNWDFRNETDLQLH
VKHNHLENQGKVHKCIFCGESFGTEVELQCHITTHSKKYNCRFCSKAFHAVILLEKHLREKHCVFETKTP
NCGTNGASEQVQKEEAELQTLLTNSQESHNSHDGSEEDVDSSEPMYGCDICGAAYTMETLLQNHQLRDHN
IRPGESAIVKKKAELIKGNYKCNVCSRTFFSENGLREHMQTHLGPVKHYMCPICGERFPSLLTLTEHKVT
HSKSLDTGNCRICKMPLQSEEEFLEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKTGNGS
SVQTTGRGQHVQKLYKCASCLKEFRSKQDLVKLDINGLPYGLCAGCVNLSKSSSPGLSLPPGASRPGLGQ
NESLSAMEGKGKAGGLKTRCSSCNVKFESESELQNHIQTVHRELVPDANSTQLKTPQVSPMPRISPSQSD
EKKTYQCIKCQMVFYNEWDIQVHVANHMIDEGLNHECKLCSQTFDSPAKLQCHLIEHSFEGMGGTFKCPV
CFTVFVQANKLQQHIFSAHGQEDKIYDCTQCPQKFFFQTELQNHTMTQHSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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