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Report for CCDS9490.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9490.1 Public Homo sapiens 13 UBAC2 24 110 108 CCDS HistoryNCBI Gene:337867Re-query CCDS DB by CCDS ID:9490.1Re-query CCDS DB by GeneID:337867See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9490.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376440.6 ENSP00000365623.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376440.6Link to Ensembl Protein Viewer:ENSP00000365623.2Re-query CCDS DB by Nucleotide ID:ENST00000376440Re-query CCDS DB by Protein ID:ENSP00000365623
Original member Current member NCBI NM_177967.4 NP_808882.1 Accepted alive Link to Nucleotide Sequence:NM_177967.4Link to Protein Sequence:NP_808882.1Re-query CCDS DB by Nucleotide ID:NM_177967Re-query CCDS DB by Protein ID:NP_808882Link to BLAST:NP_808882.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808882.1 309 Q8NBM4-2 309 100% 0 0

Chromosomal Locations for CCDS 9490.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 99201412 99201567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99238427 99238554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99314097 99314220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99318022 99318069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99340320 99340565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99367787 99367906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 99385228 99385335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGTGTTTCTTCTTCAGTCTCCAAGAAGAGTTTTTAGACAAACACACACTGATGAGAGTGCTTTCAAGTG
GAGGGAAGTTAGGAAGTCGTGGCGAGGGAGCGCAGCTGTGCTGCTGGATGTTGCTGTTTTCCTGGCGTGT
TAGCGGTGGTCAGCAGACAAGGCGCCTCTGTCGAAGAGCCTTCTGCTGGTCCCCAGTGCCCTCTCCCTCC
TGCTCGCCCTCCTCCTGCCTCACTGCCAGAAGCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGACTT
CCAGCCTGGCACCTGTGTTTGCTCTGTTTGTACCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCACA
AATTCTGGGTCCGTTGTCCATCACAAACAAGACATTGATTTATATATTGGGACTGCAGCTTTTCACCTCT
GGTTCCTACATCTGGATTGTAGCCATAAGTGGACTTATGTCCGGTCTGTGCTACGACAGCAAAATGTTCC
AGGTGCATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGACACTTGAACCCATCTT
CTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGAGACAGCAG
AGAATGGAGCTGCTGGACCGGCAGCTGATGTTCTCTCAGTTTGCACAAGGGAGGCGACAGAGACAGCAGC
AGGGAGGAATGATCAATTGGAATCGTCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAACTATCAGGG
CGGTCGGCAGTCTGAGCCAGCAGCGCCCCCTCTAGAAGTTTCTGAGGAACAGGTCGCCCGGCTCATGGAG
ATGGGATTTTCCAGAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCA
ACTTCCTGCTGCAGCACTGA

Translation (309 aa):
MCFFFSLQEEFLDKHTLMRVLSSGGKLGSRGEGAQLCCWMLLFSWRVSGGQQTRRLCRRAFCWSPVPSPS
CSPSSCLTARSSLCMTFTQSRTTSSLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTS
GSYIWIVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDIQRQQ
RMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAPPLEVSEEQVARLME
MGFSRGDALEALRASNNDLNVATNFLLQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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