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Report for CCDS57149.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57149.1 Public Mus musculus 19 Mplkipl1 23 108 98 CCDS HistoryNCBI Gene:633057Re-query CCDS DB by CCDS ID:57149.1Re-query CCDS DB by GeneID:633057See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57149.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000180168.1 ENSMUSP00000137574.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180168.1Link to Ensembl Protein Viewer:ENSMUSP00000137574.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180168Re-query CCDS DB by Protein ID:ENSMUSP00000137574
Original member Current member NCBI NM_001177513.1 NP_001170984.1 Accepted alive Link to Nucleotide Sequence:NM_001177513.1Link to Protein Sequence:NP_001170984.1Re-query CCDS DB by Nucleotide ID:NM_001177513Re-query CCDS DB by Protein ID:NP_001170984Link to BLAST:NP_001170984.1

Chromosomal Locations for CCDS 57149.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 61175459 61175995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (537 nt):
ATGTACCGACCGAATTTTCGACCCCCAACTCCTCCGTACCCCAGCCCGGGGATAGGAGGTTGGGGTGGCG
GAAATAACTTCTGGGGTGCCCTGGGCGGGGGGCCGCGGCCGCCCTCCCTGTGGGACTGTTACAGGAGTCC
GCACCACACTCCGCCCTGCGGGCCCCGTGCTAGGCCATACGGGAGCCGCCAGTCTCAGCAGCACAGCAGC
AACTTCTCAGGGGTCCGCTTCGCGTCTCCGTCCCCGGGCGGCTACCCAGGCTCCTACTCCAGGTCCCCCG
CGGGGTCCCAGCATCAGTTCGGCTACTCCCCAGGGCAGCAGCAGACCTACCCCCAGGGTTCTCCAAGGAC
ATCTACACCATTTGGATCAGGGCGTGGTAGAGAAAAAAGAATGTCTAATGAATTGGAAAGTTATTTTAAG
CCTTCAATGCTTGAAGACCCTTGGGCTGGCCTAGAACCAGTGTCTGTAGTGGATATAAGCCAACAGTACA
GCAATACGCAAACATTCACAGACAAAAAAGGAAGATACTTTTCTTAA

Translation (178 aa):
MYRPNFRPPTPPYPSPGIGGWGGGNNFWGALGGGPRPPSLWDCYRSPHHTPPCGPRARPYGSRQSQQHSS
NFSGVRFASPSPGGYPGSYSRSPAGSQHQFGYSPGQQQTYPQGSPRTSTPFGSGRGREKRMSNELESYFK
PSMLEDPWAGLEPVSVVDISQQYSNTQTFTDKKGRYFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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