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Report for CCDS988.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
988.1 Public Homo sapiens 1 TMOD4 24 110 108 CCDS HistoryNCBI Gene:29765Re-query CCDS DB by CCDS ID:988.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 988.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295314.9 ENSP00000295314.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295314.9Link to Ensembl Protein Viewer:ENSP00000295314.4Re-query CCDS DB by Nucleotide ID:ENST00000295314Re-query CCDS DB by Protein ID:ENSP00000295314
Original member Current member NCBI NM_013353.3 NP_037485.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013353.3Link to Protein Sequence:NP_037485.2Re-query CCDS DB by Nucleotide ID:NM_013353Re-query CCDS DB by Protein ID:NP_037485Link to BLAST:NP_037485.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037485.2 345 Q9NZQ9-1 345 100% 0 0

Chromosomal Locations for CCDS 988.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151170081 151170103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151170519 151170663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151170920 151171063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151171433 151171540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151171633 151171763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151172268 151172357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151173499 151173615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151174391 151174547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151174753 151174875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGTCATCATATCAGAAGGAACTGGAGAAATACAGAGACATAGATGAAGATGAGATCCTAAGGACCTTGA
GCCCCGAGGAGCTAGAGCAGCTGGACTGCGAACTACAGGAGATGGATCCTGAGAACATGCTCCTGCCAGC
TGGACTAAGACAACGTGACCAGACAAAGAAGAGCCCAACGGGGCCACTGGACCGAGAGGCCCTTTTGCAG
TACTTGGAGCAACAGGCACTAGAAGTCAAAGAGCGTGATGACTTGGTGCCCTTCACAGGCGAGAAGAAGG
GGAAACCCTATATTCAGCCCAAGAGGGAAATCCCAGCAGAGGAGCAGATCACCCTGGAGCCTGAGCTGGA
GGAGGCACTGGCACATGCCACAGATGCTGAAATGTGTGACATTGCAGCAATTCTGGACATGTACACACTG
ATGAGTAACAAGCAATACTATGATGCCCTCTGCAGTGGAGAAATCTGCAACACTGAAGGCATTAGCAGTG
TGGTACAGCCTGACAAGTATAAGCCAGTGCCGGATGAACCCCCAAATCCCACAAACATTGAGGAGATACT
AAAGAGGGTCCGAAGCAATGACAAGGAGCTGGAGGAGGTGAACTTGAATAATATACAGGACATCCCAATA
CCCATGCTAAGTGAGCTGTGTGAGGCAATGAAGGCAAATACCTATGTGCGGAGCTTCAGTCTGGTAGCCA
CGAGGAGTGGTGACCCCATTGCCAATGCAGTGGCTGACATGTTGCGTGAGAATCGTAGCCTCCAGAGCCT
AAACATCGAATCCAACTTCATTAGCAGCACAGGACTCATGGCTGTGCTGAAGGCAGTTCGGGAAAATGCC
ACACTCACTGAGCTCCGTGTAGACAATCAGCGCCAGTGGCCTGGTGATGCAGTGGAGATGGAGATGGCCA
CCGTGCTAGAGCAGTGTCCCTCTATTGTCCGCTTTGGCTACCACTTTACACAGCAGGGGCCACGAGCTCG
GGCAGCCCAGGCCATGACCCGAAACAATGAACTACGTCGCCAGCAAAAGAAGAGATAA

Translation (345 aa):
MSSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGPLDREALLQ
YLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTL
MSNKQYYDALCSGEICNTEGISSVVQPDKYKPVPDEPPNPTNIEEILKRVRSNDKELEEVNLNNIQDIPI
PMLSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENA
TLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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