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Report for CCDS16091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16091.1 Public Mus musculus 2 Dhrs9 23 108 98 CCDS HistoryNCBI Gene:241452Re-query CCDS DB by CCDS ID:16091.1Re-query CCDS DB by GeneID:241452See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16091.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063690.3 ENSMUSP00000069631.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063690.3Link to Ensembl Protein Viewer:ENSMUSP00000069631.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000063690Re-query CCDS DB by Protein ID:ENSMUSP00000069631
Original member Current member NCBI NM_175512.2 NP_780721.1 Accepted alive Link to Nucleotide Sequence:NM_175512.2Link to Protein Sequence:NP_780721.1Re-query CCDS DB by Nucleotide ID:NM_175512Re-query CCDS DB by Protein ID:NP_780721Link to BLAST:NP_780721.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780721.1 319 Q58NB6 319 100% 0 0

Chromosomal Locations for CCDS 16091.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 69392910 69393222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69394283 69394541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69397616 69397779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69401234 69401457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGCTGTTTTGGTTGTTGGCTCTCCTGTTCCTCTGTGCTTTTCTGTGGAATTATAAAGGGCAGTTGAAGA
TAGCAGACATTGCTGACAAGTATGTCTTCATCACCGGATGTGACACGGGCTTTGGAAACTTAGCAGCCAG
AACTTTTGATAAAAAAGGCTTCCGTGTCATTGCTGCCTGCCTGACTGAGTCAGGATCAGCTGCTTTGAAG
GCCAAAACCTCAGAGAGACTCCACACCGTGCTTCTGGATGTCACTGACCCAGAGAATGTCAAGAAGACGG
CCCAGTGGGTGAAGAGCCATGTAGGAGAAAAGGGTCTCTGGGGTCTGATCAATAATGCTGGTGTTCTTGG
CGTGTTGGCTCCCACTGACTGGTTGACAGTGGACGACTACAGAGAACCCATTGAAGTTAACCTGTTTGGA
CTCATCAACGTGACACTGAATATGCTTCCACTGGTCAAAAAAGCTCGAGGGCGTGTTATCAATGTCTCCA
GCATTGGAGGCCGGCTTGCATTTGGTGGAGGGGGCTATACTCCATCCAAATACGCAGTGGAGGGTTTCAA
TGACAGCCTAAGGCGGGATATGAAAGCTTTTGGTGTGCATGTCTCATGCATTGAACCAGGGCTGTTCAAA
ACAGAGCTGGCAGATCCAATCAAGACAACTGAAAAAAAACTGGCCATTTGGAAACATCTGTCTCCAGATA
TCAAACAACAATATGGAGAGGGCTACATTGAAAAAAGTCTACACAGACTGAAAAGCAATACCTCCTCGGT
GAACTTGGACCTCTCTCTAGTGGTAGGGTGCATGGACCACGCTCTAACAAGTCTCTTCCCCAAGACTCGG
TACATTGCTGGGAAAGATGCCAAGACATTCTGGATACCTCTGTCTCACATGCCAGCAGTTTTACAAGACT
TTTTATTGCTGAAACAGAAAGTAGAGCTGGCAAATCCCAAAGCTGTGTGA

Translation (319 aa):
MLFWLLALLFLCAFLWNYKGQLKIADIADKYVFITGCDTGFGNLAARTFDKKGFRVIAACLTESGSAALK
AKTSERLHTVLLDVTDPENVKKTAQWVKSHVGEKGLWGLINNAGVLGVLAPTDWLTVDDYREPIEVNLFG
LINVTLNMLPLVKKARGRVINVSSIGGRLAFGGGGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFK
TELADPIKTTEKKLAIWKHLSPDIKQQYGEGYIEKSLHRLKSNTSSVNLDLSLVVGCMDHALTSLFPKTR
YIAGKDAKTFWIPLSHMPAVLQDFLLLKQKVELANPKAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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