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Report for CCDS41865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41865.1 Public Homo sapiens 12 DDX51 24 110 108 CCDS HistoryNCBI Gene:317781Re-query CCDS DB by CCDS ID:41865.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41865.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397333.4 ENSP00000380495.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397333.4Link to Ensembl Protein Viewer:ENSP00000380495.3Re-query CCDS DB by Nucleotide ID:ENST00000397333Re-query CCDS DB by Protein ID:ENSP00000380495
Original member Current member NCBI NM_175066.4 NP_778236.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175066.4Link to Protein Sequence:NP_778236.2Re-query CCDS DB by Nucleotide ID:NM_175066Re-query CCDS DB by Protein ID:NP_778236Link to BLAST:NP_778236.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778236.2 666 Q8N8A6 666 100% 0 0

Chromosomal Locations for CCDS 41865.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 132139272 132139298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132139635 132139769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132139861 132139924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132140098 132140199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132140423 132140539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132140620 132140735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132140831 132141020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132141275 132141420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132141498 132141606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132141850 132141956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132142119 132142190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132142277 132142422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132142728 132142878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132143695 132143909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 132143993 132144296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2001 nt):
ATGGCGCTGTTCTACGTCGCGCGGTACCCGGGCCCCGATGCGGCAGCTGCGGCGGGGCCGGAGGGCGCGG
AGGCCGGGGCGCACGGCAGGGCCCGCGCGCTGCTCGAGCGGCTGCAGAGCCGGGCCCGCGAACGGCAGCA
GCAGCGGGAGCCCGCGCAGACCGAGGCGGCTGCATCGACCGAGCCGGCGACCAGGAGGCGACGGCGGCCC
CGGCGGCGGCGGCGGGTGAACGACGCGGAGCCGGGGAGCCCGGAGGCGCCGCAGGGAAAGCGACGGAAGG
CGGACGGCGAGGACGCGGGCGCAGAAAGCAACGAGGAGGCGCCAGGGGAGCCCAGCGCAGGGAGCAGCGA
GGAGGCGCCAGGGGAGCCCAGCGCAGGGAGCAGCGAGGAGGCGCCGGGGGAGCGCAGCACCAGCGCCAGC
GCCGAGGCGGCCCCAGATGGACCGGCCCTGGAGGAGGCGGCCGGACCCCTGGTCCCCGGCCTGGTGCTGG
GGGGGTTCGGGAAGAGGAAGGCGCCGAAGGTCCAGCCTTTCCTGCCAAGGTGGCTGGCTGAGCCTAACTG
TGTCAGAAGGAATGTCACCGAAGACCTGGTTCCTATCGAGGACATCCCTGACGTCCATCCTGACCTGCAG
AAGCAGCTGCGGGCACACGGCATCTCGTCCTACTTTCCAGTCCAGGCAGCTGTGATTCCTGCCCTCCTGG
AGAGCGCAGCCTGTGGGTTTCTGGTGGGCAGAGGTGGCTACCGGCCTAGCGACCTCTGTGTTTCTGCCCC
AACAGGCAGTGGGAAGACACTGGCCTTCGTCATCCCTGTGGTGCAGGCCCTGCTTTCGAGAGTGGTCTGC
CACATCCGTGCCCTGGTTGTGCTGCCCACCAAGGAGCTGGCCCAGCAGGTGAGCAAAGTTTTCAACATCT
ACACAGATGCCACACCTCTGAGAGTCTCCCTGGTTACGGGACAGAAGTCTCTGGCCAAGGAGCAGGAGAG
CCTCGTCCAGAAAACAGCTGATGGGTACCGCTGCTTGGCTGACATCGTGGTAGCCACCCCCGGCCGCCTG
GTGGACCACATCGACCAGACCCCAGGATTCAGCCTCCAGCAGCTCCGCTTCCTGATTATCGACGAGGCTG
ACCGGATGATTGACAGCATGCATCAGTCCTGGCTGCCGCGGGTGGTGGCGGCCGCCTTCCAGAGCGAGGA
CCCCGCGGACCCCTGTGCCCTGCTCCAGCGAAGGCAGGCCCAGGCTGTGACAGCCGCCAGCACCTGCTGT
CCCCAGATGCCCCTGCAGAAGCTGCTCTTCTCAGCTACTCTGACCCAGAACCCTGAAAAGCTGCAGCAGC
TGGGCCTCCACCAGCCCCGGCTTTTCTCCACAGGGCTAGCACACAGGGGCCTGGAAGATACAGATGGGGA
CGGGGATTCGGGGAAGTATGCCTTTCCTGTTGGGCTCACGCACCACTACGTGCCCTGCAGCCTCAGCTCT
AAGCCGCTGGTCGTCCTGCACCTGGTCCTGGAGATGGGCTTCTCGAGGGTTCTCTGCTTCACTAACTCCC
GAGAGAACTCCCACAGGCTCTTCCTGCTGGTGCAAGCTTTTGGGGGTGTGGACGTGGCTGAGTTCTCCTC
GCGCTACGGGCCTGGCCAGAGGAGGATGATCCTGAAGCAGTTTGAACAGGGGAAGATCCAGCTGCTCATC
AGCACGGACGCCACCGCGCGAGGCATCGACGTGCAGGGTGTGGAGCTGGTGGTGAACTACGACGCCCCCC
AGTACCTGAGAACCTACGTGCACCGGGTTGGGAGGACAGCTCGCGCTGGGAAAACTGGACAGGCCTTCAC
ACTGCTCCTGAAAGTGCAGGAGAGGAGATTCCTCCGAATGCTAACTGAAGCTGGGGCACCTGAGTTGCAG
CGGCACGAGCTCTCCAGCAAGCTGCTGCAGCCGCTGGTTCCTCGGTACGAGGAGGCCCTGTCCCAGCTGG
AGGAGTCTGTCAAGGAAGAGCGCAAGCAGAGGGCGGCCTAG

Translation (666 aa):
MALFYVARYPGPDAAAAAGPEGAEAGAHGRARALLERLQSRARERQQQREPAQTEAAASTEPATRRRRRP
RRRRRVNDAEPGSPEAPQGKRRKADGEDAGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGERSTSAS
AEAAPDGPALEEAAGPLVPGLVLGGFGKRKAPKVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQ
KQLRAHGISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVC
HIRALVVLPTKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKTADGYRCLADIVVATPGRL
VDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFQSEDPADPCALLQRRQAQAVTAASTCC
PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSS
KPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGGVDVAEFSSRYGPGQRRMILKQFEQGKIQLLI
STDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQ
RHELSSKLLQPLVPRYEEALSQLEESVKEERKQRAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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