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Report for CCDS57180.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57180.1 Public Mus musculus 2 Mapk8ip1 23 108 98 CCDS HistoryNCBI Gene:19099Re-query CCDS DB by CCDS ID:57180.1Re-query CCDS DB by GeneID:19099See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57180.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111279.8 ENSMUSP00000106910.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111279.8Link to Ensembl Protein Viewer:ENSMUSP00000106910.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000111279Re-query CCDS DB by Protein ID:ENSMUSP00000106910
Original member Current member NCBI NM_001202445.1 NP_001189374.1 Accepted alive Link to Nucleotide Sequence:NM_001202445.1Link to Protein Sequence:NP_001189374.1Re-query CCDS DB by Nucleotide ID:NM_001202445Re-query CCDS DB by Protein ID:NP_001189374Link to BLAST:NP_001189374.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001189374.1 698 Q9WVI9-3 698 100% 0 0

Chromosomal Locations for CCDS 57180.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 92384349 92384421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92384724 92384822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92384924 92384994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92385147 92385263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92385413 92385522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92385795 92385967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92386363 92386438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92386571 92387383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92387554 92387635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92388975 92389280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92391036 92391141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 92392157 92392227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2097 nt):
ATGCAGCTGGTACTGAAGATGGATTCGAGCCCAGACAATGACAGCTGGTTGGAGGATCAGTGGGAGCACT
GGCTCACCCATGACATCAGCCTGGAGGAGTTTGAGGATGAAGACCTTTCGGAGATCACTGACGAGTGTGG
CATCAGCCTGCAGTGCAAAGACACCCTGTCTCTCCGGCCCCCGCGCGCCGGGCTGCTGTCTGCGGGTAGC
AGCGGCAGCGCGGGGAGCCGGCTGCAGGCGGAGATGCTGCAGATGGACCTGATCGACGCGGCAGGTGACA
CTCCGGGCGCCGAGGACGACGAGGAGGAGGAGGACGACGAGCTCGCTGCCCAACGACCAGGAGTGGGGCC
TCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCCCGGGCACAGGCAGCGGA
GACACCTACCGACCCAAGAGGCCTACCACGCTCAACCTTTTCCCGCAGGTGCCGCGGTCTCAGGACACGC
TGAATAATAACTCTTTAGGCAAAAAGCACAGTTGGCAGGACCGTGTGTCTCGATCATCCTCCCCTCTGAA
GACAGGAGAACAGACGCCTCCACATGAACACATCTGCCTGAGTGATGAGCTGCCACCCCAGGGCAGTCCT
GTTCCCACCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCAC
CTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCCGGGGCCACTCCCATCGAGACCGAATCCACTACCA
GGCAGATGTGCGGCTCGAGGCGACTGAGGAGATCTACCTGACCCCAGTGCAGAGGCCCCCAGACCCTGCA
GAACCCACCTCCACCTTCATGCCACCCACGGAGAGCCGGATGTCAGTTAGCTCCGATCCAGACCCTGCCG
CTTACTCTGTAACTGCGGGGCGGCCACACCCCTCCATCAGTGAAGAGGATGAGGGCTTCGACTGCCTGTC
ATCCCCAGAGCGAGCTGAGCCACCAGGTGGAGGGTGGCGGGGAAGCCTCGGGGAGCCACCACCGCCTCCA
CGGGCCTCACTGAGCTCGGACACCAGCGCACTGTCCTACGACTCGGTCAAGTACACACTGGTGGTGGATG
AACATGCCCAGCTTGAGTTGGTGAGCCTGCGGCCGTGCTTTGGAGATTACAGTGACGAAAGCGACTCTGC
CACTGTCTATGACAACTGTGCCTCTGCCTCCTCGCCCTACGAGTCAGCCATTGGTGAGGAGTATGAGGAG
GCCCCTCAGCCCCGGCCTCCCACCTGCCTCTCAGAGGACTCCACCCCGGATGAGCCTGATGTCCACTTCT
CTAAGAAGTTTCTGAATGTCTTCATGAGTGGCCGCTCTCGTTCCTCCAGTGCTGAGTCCTTTGGGCTGTT
CTCCTGCGTCATCAATGGGGAGGAGCATGAGCAAACCCATCGGGCTATATTCAGGTTTGTGCCTCGGCAT
GAAGATGAACTTGAGCTGGAAGTGGATGACCCCCTGCTGGTGGAGCTGCAGGCAGAAGACTATTGGTATG
AGGCCTATAACATGCGCACCGGAGCCCGCGGGGTCTTCCCTGCCTACTATGCCATTGAGGTCACCAAGGA
GCCTGAGCACATGGCAGCCCTTGCCAAAAACAGCGACTGGATTGACCAGTTCCGGGTGAAGTTCCTGGGG
TCTGTCCAGGTTCCTTATCACAAGGGCAATGATGTCCTCTGTGCTGCTATGCAAAAGATCGCCACCACCC
GCCGGCTCACCGTGCACTTTAACCCGCCCTCCAGCTGTGTCCTTGAGATCAGTGTCAGGGGTGTCAAGAT
AGGCGTCAAAGCTGATGATGCTCTGGAGGCCAAGGGAAATAAATGTAGCCACTTCTTCCAGCTAAAGAAC
ATCTCTTTCTGTGGATACCATCCAAAGAATAACAAGTACTTTGGGTTTATCACTAAGCACCCTGCTGACC
ACCGGTTTGCCTGCCATGTCTTTGTGTCTGAAGATTCCACCAAAGCCCTGGCGGAGTCTGTGGGGCGTGC
ATTTCAGCAGTTCTACAAGCAGTTTGTGGAGTATACCTGTCCTACAGAAGATATCTACTTGGAGTAG

Translation (698 aa):
MQLVLKMDSSPDNDSWLEDQWEHWLTHDISLEEFEDEDLSEITDECGISLQCKDTLSLRPPRAGLLSAGS
SGSAGSRLQAEMLQMDLIDAAGDTPGAEDDEEEEDDELAAQRPGVGPPKAESNQDPAPRSQGQGPGTGSG
DTYRPKRPTTLNLFPQVPRSQDTLNNNSLGKKHSWQDRVSRSSSPLKTGEQTPPHEHICLSDELPPQGSP
VPTQDRGTSTDSPCRRSAATQMAPPSGPPATAPGGRGHSHRDRIHYQADVRLEATEEIYLTPVQRPPDPA
EPTSTFMPPTESRMSVSSDPDPAAYSVTAGRPHPSISEEDEGFDCLSSPERAEPPGGGWRGSLGEPPPPP
RASLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASASSPYESAIGEEYEE
APQPRPPTCLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCVINGEEHEQTHRAIFRFVPRH
EDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWIDQFRVKFLG
SVQVPYHKGNDVLCAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDALEAKGNKCSHFFQLKN
ISFCGYHPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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