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Report for CCDS56048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56048.1 Public Homo sapiens 17 TMEM235 24 110 108 CCDS HistoryNCBI Gene:283999Re-query CCDS DB by CCDS ID:56048.1Re-query CCDS DB by GeneID:283999See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000586400.5 ENSP00000466793.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000586400.5Link to Ensembl Protein Viewer:ENSP00000466793.1Re-query CCDS DB by Nucleotide ID:ENST00000586400Re-query CCDS DB by Protein ID:ENSP00000466793
Original member Current member NCBI NM_001204212.2 NP_001191141.1 Accepted alive Link to Nucleotide Sequence:NM_001204212.2Link to Protein Sequence:NP_001191141.1Re-query CCDS DB by Nucleotide ID:NM_001204212Re-query CCDS DB by Protein ID:NP_001191141Link to BLAST:NP_001191141.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191141.1 150 A6NFC5-3 150 100% 0 0

Chromosomal Locations for CCDS 56048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 78232024 78232213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78239024 78239273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78239780 78239792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGCCCGGCTGGGCGCGCTGCTCCTGGCCGCCGCCCTGGGTGCACTGCTCAGCTTCGCGCTCCTGGCCG
CCGCGGTCGCCAGCGACTACTGGTACATCCTGGAGGTGGCGGACGCCGGCAATGGCAGCGCCTGGCCCGG
GCGCGCAGAGCTGCTCTCCTCGCACTCGGGGCTCTGGCGCATCTGCGAAGGTGTCCTGACACTGGCGGGG
GTCAGCATCTACATCAGCTACTCGCACCTGGCCTTTGCGGAGACGGTGCAGCAGTATGGCCCGCAGCACA
TGCAGGGCGTCCGCGTCAGCTTCGGCTGGTCCATGGCCCTGGCCTGGGGCTCCTGTGCCTTGGAGGCATT
CAGCGGAACCCTCCTGCTCTCAGCTGCCTGGACCCTCAGCCTGAGCCCCCCAATCTGTGGTCATCTGAGT
CCCCAGCAGGTGGGAGGGAGAGGGGGAGACTGA

Translation (150 aa):
MARLGALLLAAALGALLSFALLAAAVASDYWYILEVADAGNGSAWPGRAELLSSHSGLWRICEGVLTLAG
VSIYISYSHLAFAETVQQYGPQHMQGVRVSFGWSMALAWGSCALEAFSGTLLLSAAWTLSLSPPICGHLS
PQQVGGRGGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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