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Report for CCDS56793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56793.1 Public Mus musculus 11 Zfp616 23 108 98 CCDS HistoryNCBI Gene:327963Re-query CCDS DB by CCDS ID:56793.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56793.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178159.1 ENSMUSP00000136549.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178159.1Link to Ensembl Protein Viewer:ENSMUSP00000136549.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178159Re-query CCDS DB by Protein ID:ENSMUSP00000136549
Original member Current member NCBI NM_001177570.1 NP_001171041.1 Accepted alive Link to Nucleotide Sequence:NM_001177570.1Link to Protein Sequence:NP_001171041.1Re-query CCDS DB by Nucleotide ID:NM_001177570Re-query CCDS DB by Protein ID:NP_001171041Link to BLAST:NP_001171041.1

Chromosomal Locations for CCDS 56793.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 74082907 74085870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2964 nt):
ATGGTGTGTACACAAAATTATTTTCAAAAAGAAATAACACAAGTATTTGGACTTAATGGTCTTTTAGACC
TATATAGAAAGAAGTTTTGGGAATATAGAAGTGGTGGTGAGGAGCATGAAATATGTGATTATGAAAATTA
TCTGCTGGCAAAACACATCTGTTTTAATTCTGAAAAGAATAAAGGAGTTCTAGCTATTCCTGAGAGAACT
CAGGCTGAGTCACTCCCATTTTTACAATTGGAGACTACTCTAGCAGAATTTTTACAAATTTTGAAATGCA
ACAATGTTCTACACAGGAATACAAAAACCTTAAAGAGTGACATTTGGGTGAATAAACCCACTTCCCTGAA
GCATTTATCAAGTAGTATGGGATTTAACAGTACTTCAATACTTTATGAACAAAGGAGATATTGGAGAAGA
GAAAAAATTACTGAATATCATCAATGTGAAAGATATTTCTCTAAAAATTCATTACAGCTTCCTCAACAAT
TAAATCTACTCTGTGACAAGTTCTACCATGTAGGTCAACATAAGAAAATGTCCATGTATGCAGTGAAACT
TGGAACATATCATGTGGAAGGTAGTTGTGGAAACTCCAACAGAGTAAATGATAGTAACATGGGCTATATT
AAAAACCCTTTTCTGAAGTATTGCCAAAACAATCAACATGGAGAGATTTTATACCAAGGTGATGTCATAT
TATATGATTCTCATCATGAAACAATTCTAAGTAAAAATGAGATAAGTAAATGTATTTCAGAAAATCATTA
TAACCATGATAGTAGACAGGCTATGTCTAATCACTGCTCTCAGTCATCTTTGCAACAGCAGGATCATACC
ACATGGAGCCTTTATAAAAATGACTGGCAGGATGACATTTTAAATGATTCCTTAATTCTTCAGGTTTATA
ACAGAATGTGGACTAAAGGAGATTTCAACAAATATACATGTGATACATACAGGAATGCTTTAATTGAATC
GTTATACTTAGAGAAAGATAACATGAAACACATTAAAAGACAACTTTCCCAGGCCCCAGGGTATAATAAG
GTCTTGAATTTCAATTCCAATGTCATTCAACACGATTCAAACCATAATGGAAAGGGAATCCAGAAAGTCA
AAGTACATTTGTATGGTATTTTCAATATACAAAATCTCTTGAGACATTCAAATTTATCAGTTGAGGAAAA
ACCCTCAAAATATAAAACACCAGAGAAATGCTCCAATAAATCCTCAGGCCTTATGGTATTTCAAGCTAGA
GGGAAACCATGGAAATGTGTGCAATGTGGCAAGTCCTTTGCTCAGTACTCAGCTCTTCAAAACCCTCACA
GGATCTGTACTGTAAAGAAACTGTATAGTTGTAAGGAATGTTTAAAATCATTTACTTGGTTCTCAAAACT
TCAAGCTCACCACAGAATACATACTACACAGGAACTTTATAAATCTAATAAGTGTGGGGAATCATTTACC
CAGTCATCAAATCTTCAAGTTTATCAGAGAATCCACCACACAGGAGACAAGCCTTACAAATGTAATGAAT
GTGGTAAATATTTTACCCATTCCTCAAGTCTTAAAGATCACCAGAGAATCCATGCAAGACACAAACCTTA
CAAATGTAATAACTGTGGGAAAAGTTTTATAAAGTCCTCAGATCTTAAAGGGCACTACAGAATCCACACA
GGAGACAAACCCTACAAATGTAATAACTGTAGGAAAAGTTTTACACAGTCCTCAGGTCTTAAAAGGCACT
ACAGAATCCACACAGGAGACAAACCTTACAAATGTAATGAATGTGGTAAATATTTTACCCAGTCTTCAAA
TCTTCAAGTTCATCAGAGAATCCACACAAAAGACAAACCTTACAAATGTAATGAATGTGGTAAATATTTT
GCCCATTCCTCAAGTCTTAAAGTACACCACAGAATCCATACAAGAAACAAAACTTATAAATGTAATAACT
GTGGGAAAAGTTTTATACGGTCCTCAGATCTTAAAAGGCACTATAGAATCCACACAGGAAACAAGCCTTA
CAAATGTAATGACTGTGGTAAATATTTTACCCATTCCTCAAGTCTTAAAGGTCACCACAGAATCCATACA
AGAGACAAGCCTTACAAATGTAATAACTGTGGGAAAAGTTTTAGACAGTCCTCAAGTCTTAAAAGGCACT
ACAGAATCCACACAGGAGACAAACCTTACAAATGTAATGAATGTGGTAAATATTTTGCCTGTTCCTCAAG
TCTTAAAAGGCACCACAGAATCCACACAGGAGACAAACCTTACAAATGTAATGAATGTGGTAAATATTTT
GCCCAGTCTTCAAATCTTCAAGTTCATCAGAGAATCCACACAAAAGACAAACCTTACAAATGTAATGAAT
GTGGTAAATATTTTGCCCGTTCCTCAAGTCTTAAAAATCACCACAGAATCCACACAGGAGACAAACCTTA
CAAATGTAATGAATGTGGTAAATATTTTGCCCAGTCTTCAAATCTTCAAGTTCATCAGAGAATCCACACA
AAAGACAAACCTTACAAATGTAATGAATGTGGTAAGTATTTTGCCCAGTATTCAAATCTTCAAGTTCATC
AGAGAATCCACACAAAAGACAAACCTTACAAATGTAATGAATGTGGTAAATATTTTGCCCGTTCCTCAAG
TCTTAAAGATCACCACAGAATCCACACAGGAGACAAACCTTACAAATGTAATGAATGTGGTAAATATTTT
GCCCAGTCTTCAAATCTTCAAGTTCATCAGAGAATCCACACAAAAGACAAACCTTACAAATGTAATGAAT
GTGGTAAGTATTTTGCCCAGTATTCAAATCTTCAAGTTCATCAGAGAATCCACACAGGAGACAAACCTTA
CAAATGTAATGAATGTGGTAAATATTTTGCCAGTTCCTCAAATCTTAAAGTACACCACAGAATCCACACA
GGATACAAACCTTTACAAATGTAA

Translation (987 aa):
MVCTQNYFQKEITQVFGLNGLLDLYRKKFWEYRSGGEEHEICDYENYLLAKHICFNSEKNKGVLAIPERT
QAESLPFLQLETTLAEFLQILKCNNVLHRNTKTLKSDIWVNKPTSLKHLSSSMGFNSTSILYEQRRYWRR
EKITEYHQCERYFSKNSLQLPQQLNLLCDKFYHVGQHKKMSMYAVKLGTYHVEGSCGNSNRVNDSNMGYI
KNPFLKYCQNNQHGEILYQGDVILYDSHHETILSKNEISKCISENHYNHDSRQAMSNHCSQSSLQQQDHT
TWSLYKNDWQDDILNDSLILQVYNRMWTKGDFNKYTCDTYRNALIESLYLEKDNMKHIKRQLSQAPGYNK
VLNFNSNVIQHDSNHNGKGIQKVKVHLYGIFNIQNLLRHSNLSVEEKPSKYKTPEKCSNKSSGLMVFQAR
GKPWKCVQCGKSFAQYSALQNPHRICTVKKLYSCKECLKSFTWFSKLQAHHRIHTTQELYKSNKCGESFT
QSSNLQVYQRIHHTGDKPYKCNECGKYFTHSSSLKDHQRIHARHKPYKCNNCGKSFIKSSDLKGHYRIHT
GDKPYKCNNCRKSFTQSSGLKRHYRIHTGDKPYKCNECGKYFTQSSNLQVHQRIHTKDKPYKCNECGKYF
AHSSSLKVHHRIHTRNKTYKCNNCGKSFIRSSDLKRHYRIHTGNKPYKCNDCGKYFTHSSSLKGHHRIHT
RDKPYKCNNCGKSFRQSSSLKRHYRIHTGDKPYKCNECGKYFACSSSLKRHHRIHTGDKPYKCNECGKYF
AQSSNLQVHQRIHTKDKPYKCNECGKYFARSSSLKNHHRIHTGDKPYKCNECGKYFAQSSNLQVHQRIHT
KDKPYKCNECGKYFAQYSNLQVHQRIHTKDKPYKCNECGKYFARSSSLKDHHRIHTGDKPYKCNECGKYF
AQSSNLQVHQRIHTKDKPYKCNECGKYFAQYSNLQVHQRIHTGDKPYKCNECGKYFASSSNLKVHHRIHT
GYKPLQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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