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Report for CCDS27261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27261.1 Public Mus musculus 14 Npm2 23 108 98 CCDS HistoryNCBI Gene:328440Re-query CCDS DB by CCDS ID:27261.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27261.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062629.4 ENSMUSP00000057365.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062629.4Link to Ensembl Protein Viewer:ENSMUSP00000057365.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000062629Re-query CCDS DB by Protein ID:ENSMUSP00000057365
Original member NCBI NM_181345.3 NP_851990.2 Updated not alive Link to Nucleotide Sequence:NM_181345.3Link to Protein Sequence:NP_851990.2Re-query CCDS DB by Nucleotide ID:NM_181345Re-query CCDS DB by Protein ID:NP_851990
Current member NCBI NM_181345.4 NP_851990.2 Accepted alive Link to Nucleotide Sequence:NM_181345.4Link to Protein Sequence:NP_851990.2Re-query CCDS DB by Nucleotide ID:NM_181345Re-query CCDS DB by Protein ID:NP_851990Link to BLAST:NP_851990.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_851990.2 207 Q80W85 207 100% 0 0

Chromosomal Locations for CCDS 27261.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70647505 70647549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70647637 70647670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70648045 70648085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70648260 70648411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70649471 70649564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70652123 70652236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70652329 70652414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70652532 70652589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGAGTCGCCACAGCACCAGCAGCGTGACCGAAACCACAGCAAAAAACATGCTCTGGGGTAGTGAACTCA
ATCAGGAAAAGCAGACTTGCACCTTTAGAGGCCAAGGCGAGAAGAAGGACAGCTGTAAACTCTTGCTCAG
CACGATCTGCCTGGGGGAGAAAGCCAAAGAGGAGGTGAACCGTGTGGAAGTCCTCTCCCAGGAAGGCAGA
AAACCACCAATCACTATTGCTACGCTGAAGGCCTCCGTCCTGCCCATGGTCACTGTGTCAGGTATAGAGC
TTTCTCCTCCAGTAACTTTTCGGCTCAGGACTGGCTCAGGACCTGTGTTCCTCAGTGGCCTGGAATGTTA
TGAGACTTCGGACCTGACCTGGGAAGATGACGAGGAAGAGGAGGAAGAGGAGGAGGAAGAGGATGAAGAT
GAGGATGCAGATATATCGCTAGAGGAGATACCTGTCAAACAAGTCAAAAGGGTGGCTCCCCAGAAGCAGA
TGAGCATAGCAAAGAAAAAGAAGGTGGAAAAAGAAGAGGATGAAACAGTAGTGAGGCCCAGCCCTCAGGA
CAAGAGTCCCTGGAAGAAGGAGAAATCTACACCCAGAGCAAAGAAGCCAGTGACCAAGAAATGA

Translation (207 aa):
MSRHSTSSVTETTAKNMLWGSELNQEKQTCTFRGQGEKKDSCKLLLSTICLGEKAKEEVNRVEVLSQEGR
KPPITIATLKASVLPMVTVSGIELSPPVTFRLRTGSGPVFLSGLECYETSDLTWEDDEEEEEEEEEEDED
EDADISLEEIPVKQVKRVAPQKQMSIAKKKKVEKEEDETVVRPSPQDKSPWKKEKSTPRAKKPVTKK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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