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Report for CCDS51749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51749.1 Public Mus musculus 6 D630045J12Rik 23 108 98 CCDS HistoryNCBI Gene:330286Re-query CCDS DB by CCDS ID:51749.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51749.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169256.4 ENSMUSP00000130121.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169256.4Link to Ensembl Protein Viewer:ENSMUSP00000130121.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169256Re-query CCDS DB by Protein ID:ENSMUSP00000130121
Original member Current member NCBI NM_194061.3 NP_918950.2 Accepted alive Link to Nucleotide Sequence:NM_194061.3Link to Protein Sequence:NP_918950.2Re-query CCDS DB by Nucleotide ID:NM_194061Re-query CCDS DB by Protein ID:NP_918950Link to BLAST:NP_918950.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_918950.2 1940 Q68FD9 1940 100% 0 0

Chromosomal Locations for CCDS 51749.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 38128321 38128575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38130782 38130927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38136834 38136994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38139423 38139469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38142592 38142909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38147120 38147273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38148336 38148559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38149556 38149761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38155130 38155245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38158048 38158244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38168091 38168275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38174148 38174325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38177607 38177755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38178831 38178890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38181314 38181497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38183965 38184092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38190551 38190728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38191676 38191764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38194384 38197089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38253868 38254009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5823 nt):
ATGGAGCGGGAGCCCCGCGCCAGGGTTGCACTGGTGCCGGAGCGGTGCGGCCGCGGGCCTTCCTCCCGCC
ACCGCCGCCCGGGGCTGCTGCTCCCCGGCCTCTGGCTGCTGCTGCTCGCCGGGCCGGCCTCGTGCGCCCC
AGATGACCTCTCCCTGGCTCAGCACAGCCATCCTGTACGCCCCTCGGACTTCCTGCCAGAGAGAAGCATC
CTGCACAGTGCTGCACAAGTGACCTTATCAGAGACTGTTCCCAGGTCCCAACCAAGCATCTCTGCCCTTG
TCCTCTCCTCTCCGTCAGCGACAGCTTTTGATACAGCCTTTTTAAGCCAGAGACAACAGACTCAAAGTAC
AGCGGAGCCCAGTTTCTTTGAGGCAAATTACGGATCCGTGACGAGTAATGAGGTGGCCCTCGATGATGAG
GAGATGGATAACTTTTTGCCAGATGCTCATTGGACCTCTTCAAGGGGGGTTTCCCCAATGCGGTATATCA
CACCGAGTCCACCAGAGCCACCCCAGGAAATGCTGGAGCCTGGCACGACCCCATCACTTCCCACCATTTC
TTTGCCGGATGAAGTGCTGTCCGGATGTCAGAACACAGTGCAACAGGCAACTGTATATGTGGAGCCGTCC
ACGTACTTCGGCACTTCTTGGTCAGCTTTTCTCACGTCTGAGGGCATCATTCCAACTCCTAGTAGGAATT
CGGTGCTTCATCCTATAGAAATTCACAGCCAGTTATCAAGCAAGGCTTTGCCAGAGACAGTAGCTTCTGT
AACAGAGGGCGCAGAAAACCTCCTTTTTAGCTCCCGGATTTCAGTGTCTCAGCCATCAGGCAATGGCATG
ACTCAACAGCCATCTGTCCCCCTGTGGGAGGTCTCACAGCCTCTAGTGGGTGTCCTGGCCACAAGCTCGG
ACAGATACCCTAATGAGACCACTGCTTGGATCGAACACCCAGAGGAAGCCATCGCTCTAAGAGCACACCC
TGGCATAACCACGTCACCCACAGACCCCACTTTTAGCAGTCAGCCTTCTGCTCTATTTTCAACCCCACTT
TCATCTGTGTCTTTTGCTACCCAATTACCTGGTGTTTCGGAGGACTCCTTCCTCTCTAGTGAGGCCAGGG
GAGCCTTAGAGTCATGGCATAGCTCCCCAGTCCCCAGTTTTACTGACCATCCTTATGTCCTGAGCCCCGA
GTCTTCCCTGAGACCACACACAGGGTGTGTGTCTTGCGTTGTCTCATCATTTCAACAAGAACTGGCCAGG
AGCCTAACAGAGAAGGACATGGGGTCAGGCGACAGGCTTGAGACTTTGTCTACTGCCTCGGTAGAGGCAA
GTCATGTCTCTCCATTGAGCAGTGTGGGCACAGACCTCTCTGAACTTGAAGAGCCTCAAGAATTTAATAC
GCTTTTCCCTTCCAGACCTGTGTTTTCCTTTTCTTCCAGACCTGTGGGGCTGTGGAAAGCCAGCATGGAT
GTGTCACCCGAGGTGGATGTGAGTGGCATTGCCATCACTCAGGTGTACCCTTCCCATGGCCGCCTCTCCA
CACCAAGCTCACTGGATTCGACTTTTGGCTTCTCTGTCACCAGTGATCTAGTGATGTCATCCAGTATGAT
CCATCTGTTGTCCTCTGTCATCCCCAGCACCCATTTTGACTCATCTTTCTCCTTGACTGCAAATCAAAAC
AGTCCATCCTTTCCAGCTGGAAAGCCAAGCCTTCTCACCTCTCCCAGTCTGGTCCCCTCAGCACAGTCTA
GCGCTTTCTCTCACGGAGCACCTACCAGCTCTCTGGAACTCCAGTCTGGAAGTCGTTTGGATTTCACATC
CGGCTTTTACTCCACTCCGCCCCTGGACTTCAGCACTCCAGCCCCTTCACGGTCAGACGAGCTTGCTTTC
CCATCTTTGATGTCAAGCGATCCATCAACCTTCTTTTCTCAAACTTTTTCCACCATGGCTGAGACATTTT
CACTGTCCAACTCTATGAATTTGCAATCACCTCAGCTTTCTGTTCTTAATCCCACAAGTCTAGAGCCGTC
TCAGCCACAGTCAAGTGCAGACCTTCTTTTGAACACAGTCACTGTTCTTCCTAGTCCCCCCGAGAGGCCC
CCACTTTCAAGCTCCCCCTCTGACTCTCTCGAGTTCACCGAAGTATCCAGAGTTTCACTGAGAGAATCCC
ATGTTCATCTTACCTCAGCTTTCTCTGAAACTACCTCTGCCTTTGAATTTTCACCCATTCCCCATGAGTC
CACTATCAGCACACTGGTGCCCTCCAGCTCTGAGCCCTCTCTTGGCATCTACGCAGCTGGGACTCACCTC
ACATCACTGCCAACAACTGTTTTCCATTTGACACCCATTTTAACCGAGTCATCTCCATTCTCGACTCTGA
CACCTTCCGATGGCAGTGTGCGTGTGACAGATCATCACACACCAGTCTTACCCACACCCTCCAGTGTCAT
TCCAAGCAGCACAGAGTCGATCTCTGACCCGTACCTGTCAGCCTCCTCATCACTTGTTTCTGAAGTAAGC
CCTTCACCTCCGCCCACAAAGCCAGTCATGGGCTCATCATTGACATCCACAGATTTCCCGCCCAGTACTT
CCCCAGAACTAAGTACATCCCTGGAACTGAGCATGCCCAGTGCCAGCACTGCCCCTGGTGATACTGTGGA
CTCTGCTCTGAACAGCGAGCCTATGAGTCAGAACCCTCAGGGGAACAGTGTACCCCCTCCCCAACCCTCC
CTCGGTCCTGCTACCACCTCCACGCTTGAAGCCACAGTTGGTACACCAGCACTGGCCACAGCCAAGCCGC
CATATGTGTGTGATATTACGGTTCCCGATGTCTATTTGATCACAACTGTGCTGGCCAGACGAGCTGTGCA
GGAGTACATCATTACATCAATTAAAGAAGTGCTGAGAATCCACTTCAACCGTGCGGTGGAGCTAAAGGTT
TATGAACTGTTCACAGACTTCACATTTCTGGTAACGTCTGGTCCTTTTGTTTACACGGCGATATCAGTCA
TCAACGTCCTCATCAATAGCAAACTTGTGCGTGGCCAGACGCCTTTAATCCTGTCTGTGAAGCCATCTTT
TCTCGTGCCAGATCCCAGGTTTCAAGTTCAAACAGTACTGCAGTTCGTGCCTCCGAGTGTCGATACTGGC
TTCTGCAACTTCACTCAGAGCATTGAGAAAGGCCTGGTGACAGCTCTCTTTGAAGTGAGGAAACACCAGG
GAACATATAACCTCACAGTGCAGATTGTGAATGTCACCATTGCTTCTTCGAGGGTGGCTCCCCGGAGGGG
CCCAGTGAATATTATCTTTGCTGTTAAAGGCTCGCAAGGTTTTCTGAATGGGTCGGAGGTGAGCGATCTG
CTGAGGAACCTGACGGTGGTGGAGTTCAGCTTCTACCTGGGGTACCCGGTGCTACAGATCGCAGAGCCCT
TCCAATACCCGCAGCTCAATTTATCTCAGTTACTGAAGTCCTCTTGGGTCAGAACAGTCCTCCTGGGTGT
AGTGGAAAAACAGCTCCACAATGAAGTGTTTCCAGCCGAGATGGAGCGCAAACTGGCTCAGCTGCTCAGC
GAGGTGCCCACCCGAAGACGCGTGTGGCGGAGAGCCACTGTAGCTGCTGGGAACAGCGTGGTACAGGTGG
TGAACGTGTCCAGGCTGGAGGGAGATGACAACCCGGTGCAGCTCATCTACTTTGTGGAGAATCAAGATGG
AGAGAGACTCAGTGCAGTCAAGTCTTCAGATCTGATCAACAAGGTAGACCTCCAGAGGGCAGCCATCATC
CTGGGGTACCGGATTCAAGGCGTCATTGCCCAGCCTGTGGACAGGGTGAAGAGGCCATCCCCAGAGTCAC
AGAGCAACAACCTCTGGGTCGTGGTTGGCGTGGTCATTCCCGTGCTGGTGGTCACCGTAATTGTTGTTAT
CCTCTACTGGAAGTTGTGCCGCACGGACAAGCTAGACTTCCAGCCAGACACGGTGGCCAACATACAGCAG
CGGCAGAAGCTGCAGATCCCCAGCGTGAAGGGCTTCGATTTTGCTAAGCAGCATCTGGGCCAGCACAATA
AAGACGACATCCTGATTATTCATGAGCCAGCGCCACTGCCAGGCCCTGTGAAGGACCACACCACACCCTC
AGAAAACGGAGATGTGCCGAGCCCCAAGTCAAAGCTCCCTTCCAAGAACATACGGCTCAGAGGGAGAGTT
TCCCCCTCAGATGCTGACTCAACAGTCAGCGAGGAGTCCAGCGAGAGGGACGCGGGAGAGAAGGCGCCGG
CTGCTGCCCCTGAGAACAAGGCTCTCAGAGCTCCGCAGAGTGGCGCCCCCCTGCCCAGTTCAGGCAATGA
GCAGCATTCCTCAGCCTCCATCTTTGAGCACGTGGACAGGGTTTCGAGGACCTCAGAGGCCAGCCGCCGG
GTCCCCAGTAAGATCCAGCTGATTGCCATGCAGCCCATCCCGGCCCCTCCAGCGCAGCACCCTGTCCTGG
CCGACCGAGTGGCAGAGACCAACAAAATCAACAAGGAGATCCAGTCAGCACTGCGCCACAAGTCGGAGAT
TGAGCATCACCGCAACAAGATTCGCCTTCGTGCCAAACGCCGAGGCCACTACGAGTTCCCGGTGGTGGAT
GACCTGTCCTCTGGTGACACCAAGGAGCGACACCGAGTATACCGCAGGGCACAAATGCAGATTGACAAGA
TCCTGGACCCCGCAGCCAGTGTGCCCTCTGTGTTCATAGAGCCCAGGAAGAGCTCACGGATGAAACGTTC
TCCTAAGCCACGCCGGAAACACCAGGTCAACGGCTGTCCCGCTGATGCGGAGAAGGACCGACTCATCACC
ACAGACAGTGACGGCACATACAAGCGGCCTCCCGGTGTGCACAACTCTGCCTACATCGGATGCCCGTCTG
ATCCTGACCTCCCAGCTGATGTCCAGACACCCTCCTCTACAGAGCTGGGCAGGTATCCCGGCCTGCCCTT
CTCAGCCTCTCAGTACATCCCGCCTCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTG
GATGACGCCTTTGCCCTCGTGGCTCCCAGCAGCCAGCCCACCAATGCTATGGGAGCGGGTACTGGTGTGC
CTGCCAGCCTACCTGTGAATAGCACCCCGTCCAGGGAAGAGAGGCGAGCCACGCAGTGGGGGTCCTTCTA
CAGTCCAGCTCAGACGGCCAACAACCCTTGCAGCAGATACGAGGACTATGGGATGACTCCCCCATCGGGC
CCATTGCCAAGCAGACCTAGCTTTGGCCCAGGGTTGCTGCCGTCTTCAGAGTTGGTTCCCCCTGAACCCC
CACAGCCACAGTCATCAACTGATGCTCCATATGCTGCCCGAGGGATCTACTCAGAGGAGATGCCATCAGT
GGCCCGGCCTCGGCCTGTTGGGGGCACCACAGGCTCCCAGATCCAGCATCTGACACAGGTGGGGATTGCA
AGCAGAATCGGGGCCCAGCCAGTGGAGATTCCTGCCGGCAGAGGCAGCCAGTACGGGGGACCAGGCTGGC
CTGTGTACGGGGAGGAGGAGGCAGGGCGAAGAGAAGCCACCCACATGCTCGGACATCAAGAGTATTCTTC
TTCACCGCTGTTTCAGGTGCCAAGGACTTCGGGCAGGGAGCCCTCAGCCCCTCCCGGGAACCTCGCCCAC
CGAGGGCTGCAGGGCCCTGGGCTGGGTTACCCCACCAGCTCCACAGAGGACCTCCAGCCCGGCCACTCCT
CCGCCTCCCTCATCAAAGCGATCCGCGAGGAGCTCCTGCGGCTCTCTCAGAAACAGGGCTCAGTACAGAA
CTTCCACAGCTGA

Translation (1940 aa):
MEREPRARVALVPERCGRGPSSRHRRPGLLLPGLWLLLLAGPASCAPDDLSLAQHSHPVRPSDFLPERSI
LHSAAQVTLSETVPRSQPSISALVLSSPSATAFDTAFLSQRQQTQSTAEPSFFEANYGSVTSNEVALDDE
EMDNFLPDAHWTSSRGVSPMRYITPSPPEPPQEMLEPGTTPSLPTISLPDEVLSGCQNTVQQATVYVEPS
TYFGTSWSAFLTSEGIIPTPSRNSVLHPIEIHSQLSSKALPETVASVTEGAENLLFSSRISVSQPSGNGM
TQQPSVPLWEVSQPLVGVLATSSDRYPNETTAWIEHPEEAIALRAHPGITTSPTDPTFSSQPSALFSTPL
SSVSFATQLPGVSEDSFLSSEARGALESWHSSPVPSFTDHPYVLSPESSLRPHTGCVSCVVSSFQQELAR
SLTEKDMGSGDRLETLSTASVEASHVSPLSSVGTDLSELEEPQEFNTLFPSRPVFSFSSRPVGLWKASMD
VSPEVDVSGIAITQVYPSHGRLSTPSSLDSTFGFSVTSDLVMSSSMIHLLSSVIPSTHFDSSFSLTANQN
SPSFPAGKPSLLTSPSLVPSAQSSAFSHGAPTSSLELQSGSRLDFTSGFYSTPPLDFSTPAPSRSDELAF
PSLMSSDPSTFFSQTFSTMAETFSLSNSMNLQSPQLSVLNPTSLEPSQPQSSADLLLNTVTVLPSPPERP
PLSSSPSDSLEFTEVSRVSLRESHVHLTSAFSETTSAFEFSPIPHESTISTLVPSSSEPSLGIYAAGTHL
TSLPTTVFHLTPILTESSPFSTLTPSDGSVRVTDHHTPVLPTPSSVIPSSTESISDPYLSASSSLVSEVS
PSPPPTKPVMGSSLTSTDFPPSTSPELSTSLELSMPSASTAPGDTVDSALNSEPMSQNPQGNSVPPPQPS
LGPATTSTLEATVGTPALATAKPPYVCDITVPDVYLITTVLARRAVQEYIITSIKEVLRIHFNRAVELKV
YELFTDFTFLVTSGPFVYTAISVINVLINSKLVRGQTPLILSVKPSFLVPDPRFQVQTVLQFVPPSVDTG
FCNFTQSIEKGLVTALFEVRKHQGTYNLTVQIVNVTIASSRVAPRRGPVNIIFAVKGSQGFLNGSEVSDL
LRNLTVVEFSFYLGYPVLQIAEPFQYPQLNLSQLLKSSWVRTVLLGVVEKQLHNEVFPAEMERKLAQLLS
EVPTRRRVWRRATVAAGNSVVQVVNVSRLEGDDNPVQLIYFVENQDGERLSAVKSSDLINKVDLQRAAII
LGYRIQGVIAQPVDRVKRPSPESQSNNLWVVVGVVIPVLVVTVIVVILYWKLCRTDKLDFQPDTVANIQQ
RQKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPVKDHTTPSENGDVPSPKSKLPSKNIRLRGRV
SPSDADSTVSEESSERDAGEKAPAAAPENKALRAPQSGAPLPSSGNEQHSSASIFEHVDRVSRTSEASRR
VPSKIQLIAMQPIPAPPAQHPVLADRVAETNKINKEIQSALRHKSEIEHHRNKIRLRAKRRGHYEFPVVD
DLSSGDTKERHRVYRRAQMQIDKILDPAASVPSVFIEPRKSSRMKRSPKPRRKHQVNGCPADAEKDRLIT
TDSDGTYKRPPGVHNSAYIGCPSDPDLPADVQTPSSTELGRYPGLPFSASQYIPPQPSIEEARQTMHSLL
DDAFALVAPSSQPTNAMGAGTGVPASLPVNSTPSREERRATQWGSFYSPAQTANNPCSRYEDYGMTPPSG
PLPSRPSFGPGLLPSSELVPPEPPQPQSSTDAPYAARGIYSEEMPSVARPRPVGGTTGSQIQHLTQVGIA
SRIGAQPVEIPAGRGSQYGGPGWPVYGEEEAGRREATHMLGHQEYSSSPLFQVPRTSGREPSAPPGNLAH
RGLQGPGLGYPTSSTEDLQPGHSSASLIKAIREELLRLSQKQGSVQNFHS


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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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