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Report for CCDS23291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23291.1 Public Mus musculus 9 Slc51b 23 108 98 CCDS HistoryNCBI Gene:330962Re-query CCDS DB by CCDS ID:23291.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23291.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065894.6 ENSMUSP00000064494.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065894.6Link to Ensembl Protein Viewer:ENSMUSP00000064494.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000065894Re-query CCDS DB by Protein ID:ENSMUSP00000064494
Original member Current member NCBI NM_178933.2 NP_849264.1 Accepted alive Link to Nucleotide Sequence:NM_178933.2Link to Protein Sequence:NP_849264.1Re-query CCDS DB by Nucleotide ID:NM_178933Re-query CCDS DB by Protein ID:NP_849264Link to BLAST:NP_849264.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_849264.1 128 Q80WK2 128 100% 0 0

Chromosomal Locations for CCDS 23291.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 65412797 65413001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65413924 65414014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65415167 65415257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGGACCACAGTGCAGAGAAAGCTGCAGCCAATGCCGAGGTGCCCCAGGAACTGCTGGAAGAAATGCTTT
GGTATTTTCGTGCAGAAGATGCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCAT
GACAAGCATGTTCCTCCTGAGAAGGAGCATCCTGGCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAA
GAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAG
AGACATTGATCTCAGAGAAACCAGACTTGGCCCCGGGGGAACCTGAGTTGAAAGAGAAAGACTCATCACT
TGTCTTTCTGCCAGACCCACAGGAAACAGAGAGCTAG

Translation (128 aa):
MDHSAEKAAANAEVPQELLEEMLWYFRAEDAAPWNYSILVLAVLVVMTSMFLLRRSILANRNRKKQPQDK
ETPEDLHLDDSIMKENNSQVFLRETLISEKPDLAPGEPELKEKDSSLVFLPDPQETES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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