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Report for CCDS48649.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48649.1 Public Mus musculus 10 Zfp781b 23 108 98 CCDS HistoryNCBI Gene:331188Re-query CCDS DB by CCDS ID:48649.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48649.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076281.5 ENSMUSP00000075630.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076281.5Link to Ensembl Protein Viewer:ENSMUSP00000075630.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000076281Re-query CCDS DB by Protein ID:ENSMUSP00000075630
Original member Current member EBI ENSMUST00000219144.1 ENSMUSP00000151576.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000219144.1Link to Ensembl Protein Viewer:ENSMUSP00000151576.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000219144Re-query CCDS DB by Protein ID:ENSMUSP00000151576
Original member Current member NCBI NM_199062.2 NP_951017.1 Accepted alive Link to Nucleotide Sequence:NM_199062.2Link to Protein Sequence:NP_951017.1Re-query CCDS DB by Nucleotide ID:NM_199062Re-query CCDS DB by Protein ID:NP_951017Link to BLAST:NP_951017.1

Chromosomal Locations for CCDS 48649.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81905073 81905665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81906467 81906593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81910888 81910899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (732 nt):
ATGCCCCAACAGGATGCAGTGACCTATGAGGATGTGCATGTGAACTTCACCAAAGAAGAGTGGACTTTGC
TGCATCCTTCTCAGAAGAGTCTCTACAGAGATGTGATGCTGGAAACGTGCAGGAACCTCACTGCTATAGG
AATAATATCTGTCACTCTGGACCCCAGCCTTGTGAGTATCAGGGATATGGAAAGAAGCAATGTACTGTTA
CAAGTAACAGTGTTCTTCAAACTTACGGAAGAGTCCATACTGACGAGAAATCCTGTAAACGTAATCAGTG
CAGTAAACCCATTGCAAATTCTAATAGTCTTCGACAGCATGAAAGAAGTCATAGTAGAAGAAAACTCTAT
GAATGTAATTACTGTGGTAAAGCTTTTCCAAGTCGAAGTTCTCTTCAAGTACATGAAAGAACTCATACAG
GAGAGAAGCCCTATGGGTGCAATGAATGTGGGAAAGCCTTTTCAACTCGCAGTCATCTTCAAATTCACCA
AAGAACTCACACTGGAGAGAAACCCTACGGGTGCAGTGAGTGTGGGAAAGCCTTTGCAAGTAAAGGTAAT
CTTCAAACGCACCAAAGAACTCACACAGGAGAGAAACCTTATTGCTGCCATGAATGTGGGAAAGCCTTTG
CTACTCACAATAATCTTCAAATACATGAAATCATTCATACTGGAGAAAAACCCTATGAATGTAATGAATG
TGGTAGAGCATTTGCATACAGCAGAGCTCTAG

Translation (243 aa):
MPQQDAVTYEDVHVNFTKEEWTLLHPSQKSLYRDVMLETCRNLTAIGIISVTLDPSLVSIRDMERSNVLL
QVTVFFKLTEESILTRNPVNVISAVNPLQILIVFDSMKEVIVEENSMNVITVVKLFQVEVLFKYMKELIQ
ERSPMGAMNVGKPFQLAVIFKFTKELTLERNPTGAVSVGKPLQVKVIFKRTKELTQERNLIAAMNVGKPL
LLTIIFKYMKSFILEKNPMNVMNVVEHLHTAEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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