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Report for CCDS29667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29667.1 Public Mus musculus 19 Or5b124 23 108 98 CCDS HistoryNCBI Gene:258628Re-query CCDS DB by CCDS ID:29667.1Re-query CCDS DB by GeneID:258628See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29667.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053113.4 ENSMUSP00000062444.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053113.4Link to Ensembl Protein Viewer:ENSMUSP00000062444.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000053113Re-query CCDS DB by Protein ID:ENSMUSP00000062444
Original member Current member EBI ENSMUST00000217182.2 ENSMUSP00000149711.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217182.2Link to Ensembl Protein Viewer:ENSMUSP00000149711.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217182Re-query CCDS DB by Protein ID:ENSMUSP00000149711
Original member Current member NCBI NM_146635.1 NP_666846.1 Accepted alive Link to Nucleotide Sequence:NM_146635.1Link to Protein Sequence:NP_666846.1Re-query CCDS DB by Nucleotide ID:NM_146635Re-query CCDS DB by Protein ID:NP_666846Link to BLAST:NP_666846.1

Chromosomal Locations for CCDS 29667.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13633113 13634054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGCATAATATTTCCGAAGTCACTGAATTTATCCTTGTGGGATTAACAGATGCCCCAGGGCTACAGGTCC
CTTTATTTATCATCTTCACTTTTATTTACTTGACCACATTGTTTGGTAACCTTGGGATGATTGTGTTGAT
TCTCCTGGACTCTAGTCTCCACACTCCCATGTACTTTTTTCTTAGTAACCTCTCACTGGTGGATTGTGTT
TATGCCTCAGCTGTCACTCCCAAGGTAATAGAAGGGTTTCTCACAGAAAAGAAGATCATATCCTACAATG
CATGCGCTACACAGATGTTCTTCTTAATAGGATTTGCAATTATTGAAGGTTTTCTCTTAGCATCAATGGC
CTATGATCGTCATGCAGCAGTGTGCAAACCCTTGTACTACTCTACCTCCATGACAACAACAATATGTACC
CTGCTCATTGTGGGTTCTTACATCAGTGGACTCTTACAATCTTCTATCCATGTTGCCTTCACTTTCCACC
TCTCCTTTTGCCATTCCAATGTAGTAAATCACTTTTTTTGTGACATTCCCCCACTACTGGCTCTTTCTTG
CTCTAGTGTTTATATAAATGAAATTGTACTGTTTATCTTGGCAGCACTCAATATAGCTTTAACTATATTG
GTTATCGTGAACTCTTATGTACTTATTTTTGTTGCAATCTTGAGGATGCGTTCTACTGATGGACAAAAGA
AGGCCATTTCCACCTGTGCATCCCACCTCACCACTGTTTCAATCTTCTATGGCACAATTATCTTCATGTA
CTTACAGCCCAGCTCCACTCACTCCATGGACACTGACAAGGTAGCATCTGTATTCTATACCATGATCATT
CCCATGCTTAACCCTCTTGTCTATAGCCTGAGGAACAAAGAAGTCAAGAATGCATTTAAAAAGGTTACTA
GAAAAGTGTTGTTTTCACTGGGATTAGTCTAA

Translation (313 aa):
MHNISEVTEFILVGLTDAPGLQVPLFIIFTFIYLTTLFGNLGMIVLILLDSSLHTPMYFFLSNLSLVDCV
YASAVTPKVIEGFLTEKKIISYNACATQMFFLIGFAIIEGFLLASMAYDRHAAVCKPLYYSTSMTTTICT
LLIVGSYISGLLQSSIHVAFTFHLSFCHSNVVNHFFCDIPPLLALSCSSVYINEIVLFILAALNIALTIL
VIVNSYVLIFVAILRMRSTDGQKKAISTCASHLTTVSIFYGTIIFMYLQPSSTHSMDTDKVASVFYTMII
PMLNPLVYSLRNKEVKNAFKKVTRKVLFSLGLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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