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Report for CCDS29784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29784.1 Public Mus musculus 19 Rbp4 23 108 98 CCDS HistoryNCBI Gene:19662Re-query CCDS DB by CCDS ID:29784.1Re-query CCDS DB by GeneID:19662See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29784.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112335.3 ENSMUSP00000107954.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112335.3Link to Ensembl Protein Viewer:ENSMUSP00000107954.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112335Re-query CCDS DB by Protein ID:ENSMUSP00000107954
Original member Current member NCBI NM_011255.3 NP_035385.1 Accepted alive Link to Nucleotide Sequence:NM_011255.3Link to Protein Sequence:NP_035385.1Re-query CCDS DB by Nucleotide ID:NM_011255Re-query CCDS DB by Protein ID:NP_035385Link to BLAST:NP_035385.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035385.1 201 Q00724 201 100% 0 0

Chromosomal Locations for CCDS 29784.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38116872 38116909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38118272 38118484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38124029 38124135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38124296 38124432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38124519 38124629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGAGTGGGTGTGGGCGCTCGTGCTGCTGGCGGCTCTGGGAGGCGGCAGCGCCGAGCGCGACTGCAGGG
TGAGCAGCTTCCGAGTCAAGGAGAACTTCGACAAGGCTCGTTTCTCTGGGCTCTGGTATGCCATCGCCAA
AAAGGACCCCGAGGGTCTCTTTTTGCAAGACAACATCATCGCTGAGTTTTCTGTGGACGAGAAGGGTCAT
ATGAGCGCCACAGCCAAGGGACGAGTCCGTCTTCTGAGCAACTGGGAAGTGTGTGCAGACATGGTGGGCA
CTTTCACAGACACTGAAGATCCTGCCAAGTTCAAGATGAAGTACTGGGGTGTAGCCTCCTTTCTCCAGCG
AGGAAACGATGACCACTGGATCATCGACACGGACTACGACACCTTCGCTCTGCAGTACTCCTGCCGCCTG
CAGAATCTGGATGGCACCTGTGCAGACAGCTACTCCTTTGTGTTTTCTCGTGACCCCAATGGCCTGAGCC
CAGAGACACGGAGGCTGGTGAGGCAGCGGCAGGAGGAGCTGTGCCTAGAGAGGCAGTACAGATGGATTGA
ACACAATGGTTACTGTCAAAGCAGGCCCTCCAGAAACAGTTTGTAG

Translation (201 aa):
MEWVWALVLLAALGGGSAERDCRVSSFRVKENFDKARFSGLWYAIAKKDPEGLFLQDNIIAEFSVDEKGH
MSATAKGRVRLLSNWEVCADMVGTFTDTEDPAKFKMKYWGVASFLQRGNDDHWIIDTDYDTFALQYSCRL
QNLDGTCADSYSFVFSRDPNGLSPETRRLVRQRQEELCLERQYRWIEHNGYCQSRPSRNSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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