NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS25592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25592.1 Public Mus musculus 11 Map2k6 23 108 98 CCDS HistoryNCBI Gene:26399Re-query CCDS DB by CCDS ID:25592.1Re-query CCDS DB by GeneID:26399See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25592.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020949.11 ENSMUSP00000020949.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020949.11Link to Ensembl Protein Viewer:ENSMUSP00000020949.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000020949Re-query CCDS DB by Protein ID:ENSMUSP00000020949
Original member Current member NCBI NM_011943.3 NP_036073.1 Accepted alive Link to Nucleotide Sequence:NM_011943.3Link to Protein Sequence:NP_036073.1Re-query CCDS DB by Nucleotide ID:NM_011943Re-query CCDS DB by Protein ID:NP_036073Link to BLAST:NP_036073.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036073.1 334 P70236 334 100% 0 0

Chromosomal Locations for CCDS 25592.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 110399410 110399425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110482539 110482605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110490145 110490193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110490762 110490875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110492513 110492632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110492896 110493012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110494295 110494346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110496339 110496466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110497897 110497974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110499383 110499522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110506706 110506751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110512789 110512866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1005 nt):
ATGTCTCAGTCGAAAGGCAAGAAGCGAAACCCGGGCCTTAAGATTCCAAAAGAAGCGTTTGAACAGCCTC
AGACCAGTTCCACGCCGCCTCGGGATTTAGACTCCAAGGCTTGCATATCTATTGGAAACCAGAACTTTGA
GGTGAAGGCAGATGACCTGGAGCCGATAGTGGAGCTGGGACGAGGTGCGTACGGGGTGGTGGAGAAGATG
CGTCACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGATACGGGCCACAGTTAATAGCCAGGAACAGA
AACGGCTGCTGATGGATTTGGATGTCTCCATGAGGACGGTGGACTGTCCATTCACCGTGACCTTCTACGG
TGCACTCTTCCGGGAGGGCGACGTGTGGATCTGCATGGAGCTCATGGATACGTCACTAGATAAATTCTAC
AAACAAGTTATTGATAAAGGCCAAACAATTCCAGAGGATATCTTAGGAAAGATAGCAGTTTCTATTGTAA
AAGCGTTAGAACATTTACACAGTAAGCTGTCTGTTATCCATCGAGACGTCAAGCCTTCTAATGTGCTCAT
TAACACACTGGGCCAGGTGAAGATGTGTGACTTTGGAATCAGTGGCTACCTGGTCGACTCTGTTGCTAAA
ACGATCGATGCCGGTTGCAAACCATACATGGCTCCTGAACGAATAAATCCAGAGCTCAACCAGAAGGGGT
ACAGTGTGAAGTCTGACATTTGGAGCCTGGGCATCACCATGATCGAGCTGGCCATCCTTCGGTTTCCTTA
TGATTCTTGGGGAACGCCCTTCCAGCAGCTAAAGCAGGTGGTCGAAGAGCCCTCTCCTCAGCTCCCAGCA
GACAAGTTCTCCGCGGACTTTGTTGACTTTACCTCACAGTGCTTGAAGAAAAATTCCAAAGAACGGCCCA
CATATCCAGAGCTTATGCAACATCCATTTTTCACCGTACATGAATCCAAAGCAGCAGACGTGGCATCTTT
TGTAAAACTGATACTTGGGGACTAA

Translation (334 aa):
MSQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIVELGRGAYGVVEKM
RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDVSMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFY
KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINTLGQVKMCDFGISGYLVDSVAK
TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA
DKFSADFVDFTSQCLKKNSKERPTYPELMQHPFFTVHESKAADVASFVKLILGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH