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Report for CCDS57562.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57562.1 Public Mus musculus 7 Dlg2 23 108 98 CCDS HistoryNCBI Gene:23859Re-query CCDS DB by CCDS ID:57562.1Re-query CCDS DB by GeneID:23859See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57562.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098308.3 ENSMUSP00000095910.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098308.3Link to Ensembl Protein Viewer:ENSMUSP00000095910.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098308Re-query CCDS DB by Protein ID:ENSMUSP00000095910
Original member Current member NCBI NM_001243046.1 NP_001229975.1 Accepted alive Link to Nucleotide Sequence:NM_001243046.1Link to Protein Sequence:NP_001229975.1Re-query CCDS DB by Nucleotide ID:NM_001243046Re-query CCDS DB by Protein ID:NP_001229975Link to BLAST:NP_001229975.1

Chromosomal Locations for CCDS 57562.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 92066366 92066406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92088562 92088718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92126540 92126642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92286491 92286605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92375554 92375730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92386915 92386990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92417224 92417323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92420632 92420673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92427691 92427741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92428557 92428658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92430997 92431169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92437965 92438074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92442604 92442695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92444511 92444617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGTCTTCGCAGAGATGGGAGTTAAAAGGCTGGCTACCATGGGAGCCCCGCAAGGTAGTCCTTCACAAAG
GCTCCACTGGCCTGGGCTTCAACATTGTGGGCGGGGAAGATGGAGAAGGTATTTTTGTATCCTTCATTCT
GGCCGGTGGACCAGCAGACCTGAGTGGGGAGCTCCAGAGAGGAGACCAGATCTTGTCGGTGAATGGAATC
GATCTTCGAGGAGCATCCCATGAGCAGGCAGCTGCAGCACTGAAGGGGGCTGGACAGACTGTGACAATCA
TAGCACAATATCAACCTGAAGATTACGCTCGATTTGAGGCCAAAATCCATGACCTACGAGAGCAGATGAT
GAACCACAGCATGAGCTCCGGGTCCGGGTCCCTTCGAACCAATCAGAAACGCTCCCTGTATGTCAGAGCC
ATGTTTGACTATGACAAGAGCAAGGACAGTGGGCTGCCCAGCCAAGGACTTAGTTTTAAATATGGAGACA
TCCTTCATGTCATCAATGCCTCTGATGATGAGTGGTGGCAAGCCAGAAGGGTCACACTAGATGGGGACAG
CGAGGAGATGGGCGTCATTCCCAGCAAGCGGAGGGTGGAAAGAAAGGAGCGTGCCCGATTGAAGACAGTG
AAGTTCAATGCAAAACCTGGTGTGATTGATTCCAAAGGGTCATTCAATGACAAGCGTAAAAAGAGCTTCA
TCTTTTCACGAAAATTCCCATTCTACAAGAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATCCTGAACA
ACACGTCTCTTCTAATGCCAGCGATAGCGAAAGTAGCTGCCGAGGACAAGAAGATCTCATTCTTTCCTAT
GAACCTGTCACGAGGCAGGAAATAAACTACACGCGGCCAGTGATTATCCTGGGCCCCATGAAGGATCGAA
TCAATGATGACTTGATATCTGAATTTCCTGATAAATTTGGCTCCTGTGTGCCTCATACTACGAGGCCAAA
GCGTGACTACGAAGTCGACGGCAGAGACTATCACTTTGTCATTTCTAGAGAACAAATGGAGAAAGATATC
CAAGAGCACAAATTTATAGAAGCTGGCCAGTACAATGACAATTTATACGGAACCAGTGTGCAATCTGTGA
GATTTGTAGCAGAAAGGGGCAAGCACTGTATACTTGATGTATCAGGAAATGCTATTAAGCGGTTACAAGT
CGCCCAGCTCTATCCCATTGCCATCTTCATAAAGCCCAAGTCTCTGGAACCTCTGATGGAGATGAATAAG
CGTCTGACAGAGGAACAAGCCAAGAAAACTTATGACCGGGCGATTAAACTAGAACAAGAATTTGGAGAAT
ATTTTACAGCTATTGTCCAAGGAGATACCTTAGAAGATATTTACAACCAATGCAAGCTTGTTATTGAAGA
GCAGTCTGGACCTTTCATCTGGATTCCCTCAAAGGAGAAGTTATAA

Translation (481 aa):
MSSQRWELKGWLPWEPRKVVLHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGI
DLRGASHEQAAAALKGAGQTVTIIAQYQPEDYARFEAKIHDLREQMMNHSMSSGSGSLRTNQKRSLYVRA
MFDYDKSKDSGLPSQGLSFKYGDILHVINASDDEWWQARRVTLDGDSEEMGVIPSKRRVERKERARLKTV
KFNAKPGVIDSKGSFNDKRKKSFIFSRKFPFYKNKEQSEQETSDPEQHVSSNASDSESSCRGQEDLILSY
EPVTRQEINYTRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVISREQMEKDI
QEHKFIEAGQYNDNLYGTSVQSVRFVAERGKHCILDVSGNAIKRLQVAQLYPIAIFIKPKSLEPLMEMNK
RLTEEQAKKTYDRAIKLEQEFGEYFTAIVQGDTLEDIYNQCKLVIEEQSGPFIWIPSKEKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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