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Report for CCDS12529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12529.1 Public Homo sapiens 19 NCCRP1 24 110 108 CCDS HistoryNCBI Gene:342897Re-query CCDS DB by CCDS ID:12529.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12529.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339852.5 ENSP00000342137.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339852.5Link to Ensembl Protein Viewer:ENSP00000342137.3Re-query CCDS DB by Nucleotide ID:ENST00000339852Re-query CCDS DB by Protein ID:ENSP00000342137
Original member Current member NCBI NM_001001414.2 NP_001001414.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001414.2Link to Protein Sequence:NP_001001414.1Re-query CCDS DB by Nucleotide ID:NM_001001414Re-query CCDS DB by Protein ID:NP_001001414Link to BLAST:NP_001001414.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001414.1 275 Q6ZVX7 275 100% 0 0

Chromosomal Locations for CCDS 12529.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39196983 39197319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39198053 39198115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39198202 39198253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39199170 39199265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39200346 39200484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39200616 39200756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGGAGGAGGTGCGTGAGGGACACGCGCTCGGTGGCGGGATGGAAGCCGATGGGCCCGCGAGCCTCCAGG
AGCTGCCTCCCTCGCCACGGTCGCCTTCACCGCCGCCGTCGCCGCCACCACTGCCCTCGCCGCCGTCGCT
GCCATCGCCCGCAGCCCCGGAGGCCCCCGAGCTCCCCGAGCCGGCGCAGCCGTCCGAGGCTCACGCCCGG
CAGCTGCTGCTGGAGGAGTGGGGGCCGCTGAGCGGGGGCCTGGAGCTGCCCCAGCGCCTCACCTGGAAGC
TGCTCCTGTTGCGGCGGCCGCTCTACCGCAACCTGCTGCGCTCGCCCAACCCCGAAGGCATCAACATTTA
TGAGCCAGCACCCCCTACTGGTCCCACCCAGCGACCCCTGGAAACTCTGGGCAATTTCCGTGGCTGGTAC
ATTAGAACTGAAAAGCTCCAGCAGAACCAAAGCTGGACAGTGAAGCAGCAGTGTGTGGACCTTCTGGCCG
AGGGCCTGTGGGAGGAGCTGCTGGATGACGAACAACCAGCCATTACGGTCATGGACTGGTTCGAGGACAG
CCGGCTGGATGCGTGCGTCTATGAGCTGCATGTCTGGCTGCTGGCGGCCGACCGCCGCACGGTCATTGCT
CAGCACCACGTGGCCCCCCGAACTTCTGGGAGAGGACCCCCTGGCCGCTGGGTCCAGGTGTCCCACGTAT
TCCGCCATTATGGTCCCGGTGTGCGCTTTATCCACTTCCTGCACAAGGCCAAGAACCGCATGGAGCCTGG
TGGGCTGCGGCGGACACGGGTGACCGACTCCTCCGTGTCTGTGCAGCTCCGGGAGTGA

Translation (275 aa):
MEEVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHAR
QLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRGWY
IRTEKLQQNQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIA
QHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTDSSVSVQLRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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