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Report for CCDS20825.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20825.1 Public Mus musculus 7 Ube2m 23 108 98 CCDS HistoryNCBI Gene:22192Re-query CCDS DB by CCDS ID:20825.1Re-query CCDS DB by GeneID:22192See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20825.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005714.13 ENSMUSP00000005714.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005714.13Link to Ensembl Protein Viewer:ENSMUSP00000005714.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000005714Re-query CCDS DB by Protein ID:ENSMUSP00000005714
Original member Current member NCBI NM_145578.3 NP_663553.1 Accepted alive Link to Nucleotide Sequence:NM_145578.3Link to Protein Sequence:NP_663553.1Re-query CCDS DB by Nucleotide ID:NM_145578Re-query CCDS DB by Protein ID:NP_663553Link to BLAST:NP_663553.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663553.1 183 P61082 183 100% 0 0

Chromosomal Locations for CCDS 20825.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 13035614 13035754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13035842 13035905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13036212 13036315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13036434 13036472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13036566 13036660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13037621 13037729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGATCAAGCTGTTCTCGCTGAAGCAGCAGAAGAAGGAGGAGGAGTCGGCCGGCGGCACCAAGGGCAGCA
GCAAGAAGGCGTCGGCGGCGCAGCTCCGGATTCAGAAGGACATTAACGAGCTGAACCTGCCCAAGACGTG
TGACATCAGCTTCTCAGACCCAGACGACCTCCTCAACTTCAAGCTGGTGATCTGTCCTGATGAAGGCTTC
TACAAAAGTGGCAAGTTTGTATTCAGCTTTAAGGTGGGACAGGGTTACCCACATGACCCTCCCAAGGTGA
AGTGTGAAACAATGGTTTATCATCCCAACATTGACCTCGAGGGCAACGTCTGCCTCAACATCCTCAGAGA
GGACTGGAAGCCAGTCCTTACGATAAACTCCATAATTTATGGCCTGCAGTATCTCTTCTTGGAGCCGAAC
CCTGAGGACCCACTGAACAAGGAGGCTGCTGAGGTCCTGCAGAACAACCGGCGGCTGTTTGAACAAAATG
TGCAGCGCTCCATGAGAGGTGGTTACATCGGGTCCACCTACTTCGAGCGCTGCCTGAAATAG

Translation (183 aa):
MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVICPDEGF
YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPN
PEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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