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Report for CCDS35411.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35411.1 Public Homo sapiens X CXorf66 24 110 108 CCDS HistoryNCBI Gene:347487Re-query CCDS DB by CCDS ID:35411.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35411.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370540.2 ENSP00000359571.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370540.2Link to Ensembl Protein Viewer:ENSP00000359571.1Re-query CCDS DB by Nucleotide ID:ENST00000370540Re-query CCDS DB by Protein ID:ENSP00000359571
Original member Current member NCBI NM_001013403.3 NP_001013421.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013403.3Link to Protein Sequence:NP_001013421.1Re-query CCDS DB by Nucleotide ID:NM_001013403Re-query CCDS DB by Protein ID:NP_001013421Link to BLAST:NP_001013421.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013421.1 361 Q5JRM2 361 100% 0 0

Chromosomal Locations for CCDS 35411.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 139955896 139956739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139958064 139958217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139965409 139965496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGAATCTTGTTATTTGTGTCCTACTTTTGTCCATTTGGAAAAATAATTGCATGACTACAAACCAAACCA
ATGGATCTTCTACTACAGGAGATAAACCTGTTGAATCAATGCAGACAAAATTGAACTACCTTAGAAGAAA
TCTACTCATTTTAGTTGGTATTATCATCATGGTTTTTGTCTTTATCTGTTTTTGTTATCTCCATTATAAT
TGTCTGAGCGATGATGCGTCCAAAGCAGGAATGGTCAAGAAAAAAGGCATAGCAGCCAAGTCATCTAAAA
CATCATTCAGTGAAGCCAAGACAGCCTCTCAATGCAGTCCAGAAACACAACCCATGCTATCTACTGCAGA
CAAGTCATCTGATTCATCGAGTCCAGAAAGGGCATCCGCACAATCCAGCACAGAAAAATTAATCAGACCC
TCAAGTCTACAAAAGCCATCCATACCAAACAGTGCAGGAAAGTTAACTAGGCCATCATATCCAAAAAGGT
CATCCAAGTCATCATGCTCAAAAAAATTAAGCAAGTCATCTCACCTGGAAAAGGCACATAAGAAAGGCAG
CCTAGAAAAATTATGTAAGCTAGACTATGCGTGTAAGCTAGCCAGTTCAGATAAGCCAGTCAGGCCACCT
CAGCTATTCAAGCCACTTTATTCATCTCATCCACAAAATGAAATCTCACCATCCAAGCCATTCGGTCCAC
AGGAATTGGCTAAGCCTCCCAAACATTTTAATCCAAAAAGGTCAGTGAGTCTAGGCAGGGCAGCCTTATT
ATCCAACTCTGAATTAGCTGAAACTTGTCAACCCTACAAGAAAAAACATCTTGTTGCCAAAACTTATAGG
CCTTTGGTCAATGATATTTCTGAGGCAAAGGAGAAAAACACTCAAAACCTACATGTTTCAAGCAAAGTCA
AGTCCTCTTCCAGGTCCTTTCGTAAGTTAGATTCCAGGAACAATGCATACGGTGATCATGTGAATGACAG
TGATACGATGAAATATTATAGTGAGGTTGACAGTGATAAAGTTATAATCATTACGTGTGACAGAGGGTAC
AATCAAGTCACCTCTGAAGTAACCCTAAATGATTAG

Translation (361 aa):
MNLVICVLLLSIWKNNCMTTNQTNGSSTTGDKPVESMQTKLNYLRRNLLILVGIIIMVFVFICFCYLHYN
CLSDDASKAGMVKKKGIAAKSSKTSFSEAKTASQCSPETQPMLSTADKSSDSSSPERASAQSSTEKLIRP
SSLQKPSIPNSAGKLTRPSYPKRSSKSSCSKKLSKSSHLEKAHKKGSLEKLCKLDYACKLASSDKPVRPP
QLFKPLYSSHPQNEISPSKPFGPQELAKPPKHFNPKRSVSLGRAALLSNSELAETCQPYKKKHLVAKTYR
PLVNDISEAKEKNTQNLHVSSKVKSSSRSFRKLDSRNNAYGDHVNDSDTMKYYSEVDSDKVIIITCDRGY
NQVTSEVTLND


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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