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Report for CCDS57077.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57077.1 Public Mus musculus 17 Muc21 23 108 98 CCDS HistoryNCBI Gene:672682Re-query CCDS DB by CCDS ID:57077.1Re-query CCDS DB by GeneID:672682See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57077.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000164502.2 ENSMUSP00000130987.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164502.2Link to Ensembl Protein Viewer:ENSMUSP00000130987.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000164502Re-query CCDS DB by Protein ID:ENSMUSP00000130987
Original member Current member NCBI NM_001244654.1 NP_001231583.1 Accepted alive Link to Nucleotide Sequence:NM_001244654.1Link to Protein Sequence:NP_001231583.1Re-query CCDS DB by Nucleotide ID:NM_001244654Re-query CCDS DB by Protein ID:NP_001231583Link to BLAST:NP_001231583.1

Chromosomal Locations for CCDS 57077.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 35618133 35618282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35618622 35623231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35626377 35626437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4821 nt):
ATGCAGAGGAGAAGCAGCCTCTGGTGCTGGCTGCTTTTGCAGATCCTGCTTTTAGGAAGTGGTTATGCCC
ATATTTCCTCCACCACAACTTCAAATCCTTCATCAGAAACGAAGAGCATAGCCACAGACTATGAAACCAC
CCCGACCACCACTATATCTAGCACTGCCTCAGGATCTATGCCCACCCTGACCACCAAGGCATCCAGCATT
GCCTCAGACTCTAAGCCCACCCTGACCACCACTGCATCCAGCACTGCCTCAGGATCTATGTCCACCCCGA
CCACCCCTGCATCCAGCACTGCCTCAGGCTCTACACCCACAACGACCACCACTGCATCCAGCACTGCCTC
AGGATCTACACCCACCCCAACCACCCCTGCATCCAGCACTGCCTCAGGATCTACACCTACCCCGACCACT
ACTGCATCTAGCAAAGCCTCAAGATCTGTGCCCACCACTGTATCCAGCACTGGCTCAGGCTCTACACCCA
CTCCGACCACCACTGCATCCAGCACTGCCTCAGGATCTACGCCCACCCTGACCACCACTCCATCAAGCAC
TGCCTCAGGATCTACACCTACCCCGACCACCCCTGCATCCAGCACTGCCTCAGGCTCTTCACCCACCCCA
ACCACCCCTGTATCCAGCACTGCCTCAGGATCTACACCCACCCCGACCACCACTGCATCTAGCAAGGCCT
CAGGATCTGTGCCCACCACTGTATCCAGCACTGGCTCAGGCTCTACACCCACTCTGACCACCACTGTATC
CAGCACTGTCTCAGACTCTACACCCACCCCGACCACCACTGCATCCAGCACTGCCTCAGGATCAGCACCC
ACCCCGACCACCACTGCATCTAGCACTGCCTCAGGATCTACACCCACCCTAACCACCACTGCATCCAGCA
GTGGCTCAGGCTCTACCCCCACCCTGCCCACCACTGAATCCAGCACTGCCTCAGGCTCTACACCTACCCG
GACCACCACTACATCCAGCACTGCCTCAAGATCTACACCCACTCCTACCACCACTGCATCTAGCACTGCC
TCAGGATCTACGCCCACCCCGACCACCACTGTATCCAGCACTGGATCAGGCTCTACACCTACCCTGACCA
CCACTGCATCCAGGAGTGGCTCAGGCTCTACCCCCACCCTGACCACCACTGAATCCAGCACTGCCTCAGG
CTCCTCACCCACCCTGACCACCACTGCATCCAGCTCTGCCTCAGGATCTATGCCCACCCCGACCACCACT
GCATCCAGCACTGCCTCAGGCTCCTCACCCACCCTGACCACCACTGCATCCAGCTCTGCCTCAGGATCTA
TGCCCACCCTGACCACCACTGCATCCAGCTCTGCCTCAGGCTCCTCACCCACCCTGACCACCACTGCATC
CAGCTCTGCCTCAGGATCTATGCCCACCCCGACCACCACTGTATCCAGCACTGGCTCAGGCTCTACCCCC
ACCCTGACCACCACTGAATCCAGCACTGCCTCAGGCTCTACACCTACCTGGACCACCACTACATCCAGCA
CTGCCTCAAGATCTACACCCACCCCTACCACCACTGCATCTAGCACTGCCTCAGGATCTACGCCCACCCC
GACCACCACTGTATCCAGCACTGGCTCAGGCTCTACACCTACCCTGACCACCACTGCATCCAGGAGTGGC
TCAGGCTCTACCCCCACCCTGACCACCACTGAATCCAGCACTGCCTCAGGCTCTATTCCTACCCTGACCA
CCGCTGCATCCAGCACTGCCTCAGGCTCTACACCCACCCCTACCACCACTGCATCTAGCACTGCCTCAGG
ATCTATGCCCACCCCAACCACTACTGCATCCAGCACTGGATCAGGCTCTACACCCACTCTGACCACCACT
GCATCTAGCAGTGGCTCAGGCTCTACCCCCACCCTGACCACCACTGAATCCAGCACTGCCTCAGGCTCTA
TACCTACCCTGACCTCCGCTGCATCCAGCTCTGCCTCAGGATCTATGCCCACCCCGACCACCACTGTATC
CAGCACTGGCTCAGGCTCTACACCCACCCTGACCACCACTGCATCCAGCTCTGCCTCAGGATCTATGCCC
ACCCCAACCACTACTGCATCCAGCACTGCCTCAGGCTCCTCACCCACCCTGACCACCACTGCATCCAGCT
CTGCCTCAGGATCTGCGCCCAACCCGACCACCACTGTATCCAGCACTGGCTCAGGCTCTACACCCACCCT
GACCACCACTGCATCCAGCAGTGGCTCAGGCTCTACCCCCACCCTGCCCACCACTGAATCCAGCACTGCC
TCAGGCTCTACACCTACCCGGACCACCACTACATCCAGCACTGCCTCAAGATCTACACCCACTCCTACCA
CCACTGCATCTAGCACTGCCTCAGGATCTACGCCCACCCCGACCACCACTGTATCCAGCACTGCCTCAGG
CTCTACACCTACCCTGACCACCACTGCATCCAGGAGTGGCTCAGGCTCTACCCCCACCCTGACCACCACT
GAATCCAGCACTGCCTCAGGCTCTACACCCACCCCTACCACCACTGCATCTAGCACTGCCTCAGGATCTG
CGCCCAACCCGACCACCACTGTATCCAGCACTGCCTCAGGCTCTACCCCCACCCTGCCCACCACTGCATC
TAGCAGTGGCTCAGGCTCTACCCCCACCCTGACCACCACTGAATCCAGCACTGCCTCAGGCTCCTCACCC
ACCCTGACCACCACTGCATCCAGCTCTGCCTCAGGATCTATGCCCACCCCGACCACCACTGCATCCAGCA
CTGCCTCAGGCTCCTCACCCACCCTGACCACCACTGCATCCAGCTCTGCCTCAGGATCTATGCCCACCCT
GACCACCACTGCATCCAGCTCTGCCTCAGGCTCCTCACCCACCCTGACCACCACTGCATCCAGCTCTGCC
TCAGGATCTATGCCCACCCCGACCACCACTGTATCCAGCACTGGCTCAGGCTCTACCCCCACCCTGACCA
CCACTGAATCCAGCACTGCCTCAGGCTCTACACCTACCTGGACCACCACTACATCCAGCACTGCCTCAAG
ATCTACACCCACCCCTACCACCACTGCATCTAGCACTGCCTCAGGATCTACGCCCACCCCGACCACCACT
GTATCCAGCACTGGCTCAGGCTCTACACCTACCCTGACCACCACTGCATCCAGGCGTGGCTCAGGCTCTA
CCCCCACCCTGACCACCACTGAATCCAGCACTGGCTCAGGCTCTACACCCACCCTGACCACCACTGCATC
CAGCAGTGGCTCAGGCTCTACCCCCACCCTGCCCACCACTGAATCCAGCACTGCCTCAGGCTCTACACCT
ACCCGGACCACCACTACATCCAGCACTGCCTCAAGATCTACACCCACTCCTACCACCACTGCATCTAGCA
CTGCCTCAGGATCTACGCCCACCCCGACCACCACTGTATCCAGCACTGCCTCAGGCTCTACACCTACCCT
GACCACCACTGCATCCAGGAGTGGCTCAGGCTCTACCCCCATCCTGACCACCACTGAATCCAGCACTGCC
TCAGGCTCTACACCTACCCTGACCACCGCTGCATCCAGCTCTGCCTCAGGATCTACACCCACCCCGACCA
CCACTGTATCCAGCACTGGCTCAGGCTCTACACCCACCCTGACCACCACTGCATCCAGCAGTGGCTCAGG
CTCTACCCCCACCCTGACCACCACTGAATCTAGCACTGCCTCAGGCTCTACACCTACCCAGACCACCACT
ACATCCAGCACTGCCTCAAGATCTACACCCACTCCTACCACCACTGCATCTAGCACTGCCTCAGGCTCTA
TACCTACCCCGACCACAACTGCATCAAGCATTGCCTCAGGTACTACCCCCACCCTGACCACCACTGAATC
CAGCACTGCCTCAGGCTCCTCACCCACCCCGACCACTGCTTCATCCAGCAGTGCCTCAGACTCTAAGCCC
ACCTCGACCACCACTGCATCCAGCACTGTCTCAGACTCTACACCCACCCCGACCACCAATGCATCCAGCA
GTGCCTCAGGCTCTACACCCACCCAGACCACCACTGCATCCAGAAGTGCCTCAGGATCTGTGCCCACCCT
GACCACCATTGCATTCAGCACTGCCTCAGGCTCTACACCTACCCTGACCACCACTGCATCCAACTCTGCC
TCCTCTTCTTCACCCACCCCGACTACCACTGGGCTCAGCAAGACCTCTGCATCTTCACTCAGCTTGACCT
CCACTATGACCAGCATAACCTCTGCCTCTACATTCACCCCAGCCTCCATTAGGACCAGCAAAGCTTCTGC
TTCTACATCCACCTCAGCCTCCATTAGGACCAGCATAGCCTTTGCATCTACATCTACCCCGACCACCTCT
GGACCTAGCACAGCCTCAGTCTCTACACTCAACTCGACCTCCATCAGAACCAGCACAGGTTCCAGCTCTA
GCCTGAGTGCCACCCACACTTCCTCTAGCCTGACAGTTTCCACTGGAACACACACTACCTCCAACCACAC
TGGGACTCCAGTGATGGAAGTGAAGCCCAGTGGATCCCTGAAGCCCTGGGAAATCTTTCTCATCACCCTA
GCCTCTGTTATCGTGGTCATGGGACTCTCTGCTGGGCTATTTATTTATGTGAGAAGATACCTGTCTCTGA
GAAATGCTGCTGATGGAATATTCTACAACTCCCATCCTGATCCTGGAGGATCTGCTATGACTCCAGGGAG
CCCTACCTGCTCCTGGAGGAGACCAAGAACCTTCAATGTCGTAGAGATGACAAGGATATAA

Translation (1606 aa):
MQRRSSLWCWLLLQILLLGSGYAHISSTTTSNPSSETKSIATDYETTPTTTISSTASGSMPTLTTKASSI
ASDSKPTLTTTASSTASGSMSTPTTPASSTASGSTPTTTTTASSTASGSTPTPTTPASSTASGSTPTPTT
TASSKASRSVPTTVSSTGSGSTPTPTTTASSTASGSTPTLTTTPSSTASGSTPTPTTPASSTASGSSPTP
TTPVSSTASGSTPTPTTTASSKASGSVPTTVSSTGSGSTPTLTTTVSSTVSDSTPTPTTTASSTASGSAP
TPTTTASSTASGSTPTLTTTASSSGSGSTPTLPTTESSTASGSTPTRTTTTSSTASRSTPTPTTTASSTA
SGSTPTPTTTVSSTGSGSTPTLTTTASRSGSGSTPTLTTTESSTASGSSPTLTTTASSSASGSMPTPTTT
ASSTASGSSPTLTTTASSSASGSMPTLTTTASSSASGSSPTLTTTASSSASGSMPTPTTTVSSTGSGSTP
TLTTTESSTASGSTPTWTTTTSSTASRSTPTPTTTASSTASGSTPTPTTTVSSTGSGSTPTLTTTASRSG
SGSTPTLTTTESSTASGSIPTLTTAASSTASGSTPTPTTTASSTASGSMPTPTTTASSTGSGSTPTLTTT
ASSSGSGSTPTLTTTESSTASGSIPTLTSAASSSASGSMPTPTTTVSSTGSGSTPTLTTTASSSASGSMP
TPTTTASSTASGSSPTLTTTASSSASGSAPNPTTTVSSTGSGSTPTLTTTASSSGSGSTPTLPTTESSTA
SGSTPTRTTTTSSTASRSTPTPTTTASSTASGSTPTPTTTVSSTASGSTPTLTTTASRSGSGSTPTLTTT
ESSTASGSTPTPTTTASSTASGSAPNPTTTVSSTASGSTPTLPTTASSSGSGSTPTLTTTESSTASGSSP
TLTTTASSSASGSMPTPTTTASSTASGSSPTLTTTASSSASGSMPTLTTTASSSASGSSPTLTTTASSSA
SGSMPTPTTTVSSTGSGSTPTLTTTESSTASGSTPTWTTTTSSTASRSTPTPTTTASSTASGSTPTPTTT
VSSTGSGSTPTLTTTASRRGSGSTPTLTTTESSTGSGSTPTLTTTASSSGSGSTPTLPTTESSTASGSTP
TRTTTTSSTASRSTPTPTTTASSTASGSTPTPTTTVSSTASGSTPTLTTTASRSGSGSTPILTTTESSTA
SGSTPTLTTAASSSASGSTPTPTTTVSSTGSGSTPTLTTTASSSGSGSTPTLTTTESSTASGSTPTQTTT
TSSTASRSTPTPTTTASSTASGSIPTPTTTASSIASGTTPTLTTTESSTASGSSPTPTTASSSSASDSKP
TSTTTASSTVSDSTPTPTTNASSSASGSTPTQTTTASRSASGSVPTLTTIAFSTASGSTPTLTTTASNSA
SSSSPTPTTTGLSKTSASSLSLTSTMTSITSASTFTPASIRTSKASASTSTSASIRTSIAFASTSTPTTS
GPSTASVSTLNSTSIRTSTGSSSSLSATHTSSSLTVSTGTHTTSNHTGTPVMEVKPSGSLKPWEIFLITL
ASVIVVMGLSAGLFIYVRRYLSLRNAADGIFYNSHPDPGGSAMTPGSPTCSWRRPRTFNVVEMTRI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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