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Report for CCDS59723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59723.1 Public Mus musculus 7 Zfp82 23 108 98 CCDS HistoryNCBI Gene:330502Re-query CCDS DB by CCDS ID:59723.1Re-query CCDS DB by GeneID:330502See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59723.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000182546.7 ENSMUSP00000138217.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182546.7Link to Ensembl Protein Viewer:ENSMUSP00000138217.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182546Re-query CCDS DB by Protein ID:ENSMUSP00000138217
Original member Current member NCBI NM_001252519.1 NP_001239448.1 Accepted alive Link to Nucleotide Sequence:NM_001252519.1Link to Protein Sequence:NP_001239448.1Re-query CCDS DB by Nucleotide ID:NM_001252519Re-query CCDS DB by Protein ID:NP_001239448Link to BLAST:NP_001239448.1

Chromosomal Locations for CCDS 59723.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30056153 30057519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30066241 30066367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30068065 30068073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGGCCCGTGTGTCAGTGGTGTTCAGTGATGTGTCCATAGCCTTCTCGCAGGAGGAGTGGGAGTCCCTGG
ACTTAGAACAGAGGAATTTGTACAAGGATGTGATGATGGAGAACTACCACAATGTGGCCTCGCTAGATTC
GGAAACTAAGGATGAGACCAACCAGGTGTTCTCAGAAAATGGTATTTATGAAATGAATTTATCCCAGTGG
AAGATAATGGAAAGAATTGGGAACAGTGGCCTAAAGAGCCTCCTTTTAAAAAATGGATGGGAGTCGAGAA
GAAAACAGGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAGTCAAGTGAGGCACACATCTGAAAGAGT
GTCCTCTTATGAGAAGCGCGCATTAACTACACGTCAGAGGATCCACTTTGTGGAGAAACCCTATGAGTGC
AATGAATGTGGGAAGGCCTTTAGAGTCCGCCAGCAGCTCACTTTTCATCACAGAATTCACACAGGCGAGA
AGCCCTATGAATGTAAGGAGTGTGGGATGGCCTTCAGGCAGACGGCCCACCTTACCAGGCACCAGAGACT
GCATTCTGGTGAAAAACTGTATGAATGCAAGGAGTGTGGGCAAGCTTTCATATACGGCCCCGAGCTCAGA
GCACATCAGAAGCTTCACACCGGCGAGAAGCCCTACACGTGTAGAGAATGTGGGAAAGCCTTCAGGGTAC
GGGGACAACTCACTCTCCATCAGAGGATCCATACTGGGGAGAAGCCCTATGTGTGTCAGGAGTGTGGGAA
GGCCTTCAGGCAGTTGGCGCACCTCACTCGCCATCAGAAGCTTAATGTCGTCGACAGACTGTACGAGTGT
AAAGAGTGTGGGAAAGACTTTTTGTGTGGCTCTGGCCTTAGAGTACATCACAAACTTCACACTGGTGAGA
AACCCTATGAGTGCAAGGACTGTGGGAAGGCGTTTAGAGTTCGACAGCAGCTAACGCTCCATCAGAGGAG
TCATACTGGGGAGAAGCCCTATGAGTGCACTGAGTGTGGGAAGACCTTTAGTCGGGGCTACCATCTTATT
CTCCATCACAGAATCCATACTGGAGAAAAGCCTTACGAATGCAAGGAGTGCTGGAAGGCGTTCAGTCGCT
ACTCACAGCTTATTTCGCATCAGAGCATCCATATTGGGGTTAAACCCTATGACTGCAAGGACTGTGGGAA
AGCCTTCAGACTCCTCTCTCAGCTCACACAGCATCAGAGTGTTCATGCCGGGGAGAAGCCTTACTCTTGT
AAGGAATGCGGGAAGTCTTTCAGATTGCGTCAGAAACTTGCTCTCCACCAGAGTATTCATACTGGCGAAA
AGCCCTTTGAGTGCAAAGAATGTAGGAAGGCCTTTCGACTTAATTCTTCTCTTATCCAACATCTGAGAAT
CCATTCTGGTGAGAAACCCTATGAGTGTAAAGAGTGTAAGAAGGCCTTTAGACAACATTCTCACCTCACC
CATCATCTGAAGGTTCATACTGTCAAAGTGTGA

Translation (500 aa):
MARVSVVFSDVSIAFSQEEWESLDLEQRNLYKDVMMENYHNVASLDSETKDETNQVFSENGIYEMNLSQW
KIMERIGNSGLKSLLLKNGWESRRKQERQEDPQEGYLSQVRHTSERVSSYEKRALTTRQRIHFVEKPYEC
NECGKAFRVRQQLTFHHRIHTGEKPYECKECGMAFRQTAHLTRHQRLHSGEKLYECKECGQAFIYGPELR
AHQKLHTGEKPYTCRECGKAFRVRGQLTLHQRIHTGEKPYVCQECGKAFRQLAHLTRHQKLNVVDRLYEC
KECGKDFLCGSGLRVHHKLHTGEKPYECKDCGKAFRVRQQLTLHQRSHTGEKPYECTECGKTFSRGYHLI
LHHRIHTGEKPYECKECWKAFSRYSQLISHQSIHIGVKPYDCKDCGKAFRLLSQLTQHQSVHAGEKPYSC
KECGKSFRLRQKLALHQSIHTGEKPFECKECRKAFRLNSSLIQHLRIHSGEKPYECKECKKAFRQHSHLT
HHLKVHTVKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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