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Report for CCDS57449.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57449.1 Public Mus musculus 6 Prmt8 23 108 98 CCDS HistoryNCBI Gene:381813Re-query CCDS DB by CCDS ID:57449.1Re-query CCDS DB by GeneID:381813See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57449.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032500.8 ENSMUSP00000032500.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032500.8Link to Ensembl Protein Viewer:ENSMUSP00000032500.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000032500Re-query CCDS DB by Protein ID:ENSMUSP00000032500
Original member Current member NCBI NM_201371.2 NP_958759.2 Accepted alive Link to Nucleotide Sequence:NM_201371.2Link to Protein Sequence:NP_958759.2Re-query CCDS DB by Nucleotide ID:NM_201371Re-query CCDS DB by Protein ID:NP_958759Link to BLAST:NP_958759.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958759.2 394 Q6PAK3 394 100% 0 0

Chromosomal Locations for CCDS 57449.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 127689825 127689908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127690610 127690731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127697685 127697835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127703877 127703992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127711142 127711229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127711782 127711924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127726525 127726588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127729410 127729565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127732635 127732820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127768673 127768747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGGGCATGAAACACTCCTCCCGCTGCCTGCTCCTCCGGAGGAAAATGGCGGAGAATGCAGTCGAAAGCA
CCGAGGTGAGCAGCGCCCCCCCTCAGCCCCCTCAGCCTGTCATTCCAGCCAAGCCTGTGCAATGTGTCCA
CCATGTATCCACACAGCCCAGCTGCCCTGGACGGGGCAAGATGTCCAAGCTGCTGAACCCCGAGGAGATG
ACATCGAGAGATTACTATTTCGACTCATACGCTCACTTTGGGATCCACGAGGAAATGTTGAAAGACGAGG
TGAGGACACTCACGTACCGGAACTCCATGTACCATAATAAGCATGTGTTCAAGGACAAAGTGGTACTGGA
TGTTGGGAGTGGCACAGGGATCCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGATT
GAATGTTCCAGTATTTCTGACTACTCGGAGAAGATCATTAAGGCCAATCACCTGGACAATGTCATCACCA
TATTTAAGGGCAAAGTGGAGGAGGTGGAGCTGCCTGTGGAGAAGGTGGACATCATCATCAGCGAGTGGAT
GGGCTACTGTCTGTTCTACGAGTCCATGCTCAACACCGTGATCTTTGCCAGGGACAAGTGGTTGAAACCT
GGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCAATCGAAGACAGACAGTACAAGGACT
TCAAAATCCACTGGTGGGAGAATGTCTATGGCTTTGACATGACCTGCATCCGGGATGTTGCCATGAAGGA
GCCCCTGGTGGACATCGTGGACCCAAAGCAAGTGGTGACCAATGCCTGTTTAATAAAGGAAGTGGACATT
TACACTGTGAAGACGGAAGAGCTGTCCTTCACGTCTGCCTTCTGCCTGCAGATCCAGCGCAACGACTATG
TCCATGCCCTCGTCACCTATTTTAATATTGAATTTACCAAGTGCCACAAGAAAATGGGTTTTTCTACAGC
CCCTGATGCCCCCTACACCCACTGGAAGCAGACTGTCTTCTACTTAGAAGACTACCTCACTGTCCGGAGA
GGGGAGGAAATCTACGGGACCATATCCATGAAGCCAAATGCCAAAAATGTGCGAGACCTCGATTTCACAG
TAGACTTGGATTTTAAGGGACAGCTGTGTGAAACATCTGTATCTAATGACTACAAAATGCGTTAG

Translation (394 aa):
MGMKHSSRCLLLRRKMAENAVESTEVSSAPPQPPQPVIPAKPVQCVHHVSTQPSCPGRGKMSKLLNPEEM
TSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGI
ECSSISDYSEKIIKANHLDNVITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKP
GGLMFPDRAALYVVAIEDRQYKDFKIHWWENVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDI
YTVKTEELSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRR
GEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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