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Report for CCDS70681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70681.1 Public Mus musculus 16 Smim22 23 108 98 CCDS HistoryNCBI Gene:432995Re-query CCDS DB by CCDS ID:70681.1Re-query CCDS DB by GeneID:432995See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000185147.7 ENSMUSP00000139067.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000185147.7Link to Ensembl Protein Viewer:ENSMUSP00000139067.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000185147Re-query CCDS DB by Protein ID:ENSMUSP00000139067
Original member Current member NCBI NM_001253797.1 NP_001240726.1 Accepted alive Link to Nucleotide Sequence:NM_001253797.1Link to Protein Sequence:NP_001240726.1Re-query CCDS DB by Nucleotide ID:NM_001253797Re-query CCDS DB by Protein ID:NP_001240726Link to BLAST:NP_001240726.1
Original member Current member NCBI NM_001253803.1 NP_001240732.1 Accepted alive Link to Nucleotide Sequence:NM_001253803.1Link to Protein Sequence:NP_001240732.1Re-query CCDS DB by Nucleotide ID:NM_001253803Re-query CCDS DB by Protein ID:NP_001240732Link to BLAST:NP_001240732.1

Chromosomal Locations for CCDS 70681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 5007753 5007888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5007972 5008054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5008206 5008247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (261 nt):
ATGGGGCTTTCTGATGAGGAGCTGAGGCAGGAGCTGCAGGCCACTGCAGAGGAAGTACTGGGGAGGCTGA
GG
AGCCGGCAGCTCTTCCAGTCGGAATGGGACGTCGCTGCCTTTGTGGTCTTTCTCACATTTGTGGGCAC
T
GTGCTGTTGTTGCTGTTGCTGGTCTTTGTCCATTGCTGCTGTTGTTGCTGCTGCAACACCTCCCCCAGG
CCC
CGGAAGGAAAAGCGCAATGGTGTGGATAACTTGGCCCTGGAACCTTAA


Translation (86 aa):
MGLSDEELRQELQATAEEVLGRLRSRQLFQSEWDVAAFVVFLTFVGTVLLLLLLVFVHCCCCCCCNTSPR
P
RK
EKRNGVDNLALEP



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser