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Report for CCDS56697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56697.1 Public Mus musculus 10 E030030I06Rik 23 108 98 CCDS HistoryNCBI Gene:319887Re-query CCDS DB by CCDS ID:56697.1Re-query CCDS DB by GeneID:319887See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56697.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069372.6 ENSMUSP00000065555.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069372.6Link to Ensembl Protein Viewer:ENSMUSP00000065555.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000069372Re-query CCDS DB by Protein ID:ENSMUSP00000065555
Original member Current member NCBI NM_001254745.1 NP_001241674.1 Accepted alive Link to Nucleotide Sequence:NM_001254745.1Link to Protein Sequence:NP_001241674.1Re-query CCDS DB by Nucleotide ID:NM_001254745Re-query CCDS DB by Protein ID:NP_001241674Link to BLAST:NP_001241674.1

Chromosomal Locations for CCDS 56697.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 22144421 22144514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22148489 22149012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGAGGGGAGCTGGTGGAACCCGATGGAAGTCTCCCGGGCAGTCTGATCACACTTTCTCCTTGTCCTCCG
GTCTCCTCCTCCTAGGTGCAGAGATTGTGGGCAGACTACGTAATCGCTGCGGAGGGGGAAGAGGAGGGAT
CTCCGGCGGCGGCGGCAGGGCGCGGAGACTCAGCTGGGCGGAGTTTCGCGGCTGCGCCCGGCTTGCGCCC
GCGGGCGAGAAGGTCGGTCCGTCTAGCCCGGGGGCCCCCGAGGCGTGTAAGTCAGAGAGTACGCACCCCG
GTTCCTCTGTGCCGCACCGACAGCCTGCAGCCAGCAAGGAGAAGGACAGCCTGGGTGGCGCCGATCAGAG
TACGAGTGCTTGGCAGAGATCGGCGAAGGCCCCCGACCTGAAGAATGGCGGCCGCTTCCTGATTCCGAAG
CGCCAGCGAGTACAGACCAGTGAGGAGGACTTGCGGCTCTCCACCGTCCGTGAGGTGGCGGTGCTGAGGC
ACCTGGAGACCTTAGAGCAACCCTACGTGGTCAGCCTGAAACCTGTTTGCTCAGGTTTCAGTGTTAGAGA
GCATTGGGGCGGAGCTTGCCGCCCTATCATCCTGCCACTCCCACTGCCTGCGTCCTAG

Translation (205 aa):
MRGAGGTRWKSPGQSDHTFSLSSGLLLLGAEIVGRLRNRCGGGRGGISGGGGRARRLSWAEFRGCARLAP
AGEKVGPSSPGAPEACKSESTHPGSSVPHRQPAASKEKDSLGGADQSTSAWQRSAKAPDLKNGGRFLIPK
RQRVQTSEEDLRLSTVREVAVLRHLETLEQPYVVSLKPVCSGFSVREHWGGACRPIILPLPLPAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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