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Report for CCDS57760.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57760.1 Public Mus musculus X Mamld1 23 108 98 CCDS HistoryNCBI Gene:333639Re-query CCDS DB by CCDS ID:57760.1Re-query CCDS DB by GeneID:333639See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57760.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114629.3 ENSMUSP00000110276.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114629.3Link to Ensembl Protein Viewer:ENSMUSP00000110276.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000114629Re-query CCDS DB by Protein ID:ENSMUSP00000110276
Original member Current member NCBI NM_001256048.1 NP_001242977.1 Accepted alive Link to Nucleotide Sequence:NM_001256048.1Link to Protein Sequence:NP_001242977.1Re-query CCDS DB by Nucleotide ID:NM_001256048Re-query CCDS DB by Protein ID:NP_001242977Link to BLAST:NP_001242977.1

Chromosomal Locations for CCDS 57760.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 71101548 71101643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71117481 71119394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71146186 71146435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71152190 71152230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2301 nt):
ATGGATGACTGGAAAAGTCGGCTTGTAATCGAGAACATGCTTCCCCATTTCAACATGGTGGGAAATCGTC
AGGAGACCAGAAAGCTCCAGGAATCGGGAACCAGTAAGAGAAGACAGGAAGGAGAGAACTTCCACTTCAC
AGGCATGGCTGATGGGAGCTATCCTAATAAAATCAAGAGACCTTGCCTTGAAGATGTCACCCTGTCTATG
GGCCCAGGTGCCCACCCTACTTCTCTCTCTACAGAGATGCAGATGCCCACATTAAACATGAATCCCACTT
CTGCAGACCTGGGAGTGGCTGGCCAATCATTACTCCTTGAGAACAACCCTCTGGACAGTAATGTTGTGAA
TAGCAGTGCTATGGGCTCACCATTTGGGGTGCCATCAACTGCAGACACGGGGCTGAAAGGACATGCTGTT
CCTTACTATGAGAAAAACAACAGTATGCCAGCTGTAGACCAAGAGCTTCAAGATCTGCTGGAGGAACTAA
CCAAAATTCAAGAACCTTCTTCAAATGATCTTGACCTTGAGAAGATTCTGGGGAGCAAGCCAGAAGAACC
TCTGGTTTTACATAACCCCCAGGCCCCTCTTGGTCCCCCTGCCAAGCTTCCAGTTCAGATGCCACATATG
GAAAGCCTTGGATCCAGCAAGGAGTTTGCATCTAGCTGCAGTCAAGTTGCTGGCACATCACTACCCATCA
TGCCCTCCTCCACAGGGATGAGCTACTCCATTCCTTCCAGCAGTAAGCAGATAGTCTCATCCAGTTCTTC
AACAGCACAGGCTCAGGTCAAAAACCAGGTCCAGAACATGCTCCCTGTCACTATGCCTCCATTATCTGTG
CCTCAGTGGCATCATGCCCACCAGCTGAAAGCACTGGCAGCCAGCAAGCAGGGATCTGCTACAAAACAAG
GTTCCAACCGCAATTGGTCCAGTTTGCCTCCTCCGGGTCTTTCTCCACCTTACCTTCCAGTGCCATCTCC
TCACCCACCACCACCACAACCACCACCACCACCATTCAGCCCACAGAACTTCACAGCATCCTGCATGTCA
TCCAGTAGCTTATCTGGCAGTGCTGTGCAAAGCTCGCCCAATGCCTTACTTTCCAGCATGGCCCCCAGCA
GCAATGCTTCCCTTGGGCCCACCTTGCCCTATGTTCCAGCAAAGCTCCCGGGCTTGCCTCTCAATCAGCA
ACCACAATTCAGCCCCCAGAGCTCCATTCTTGCCAATCTGGTGTCCTCTAGTGTCAAAAGCCCTCAAGGA
CACCTGATATCTGCTCTGCCTACCAGCACCCCAGGGCCATCCCCACCATACCGCCCTGAGAATCTCTCCA
GCCCCGGCTTGCCACAGCAGTCCTTCACTCCACAATACTCTCTGATCAGGAGCCTCACTCCCACCAGCAA
TCTGCTAAGCCAGCAGCAGCAACAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
CAGCAGCAGCAGCATCAGGCAAATTCCATCTTTAAGCCTATGACCAGCAGCCAGCAACCTAAAACCTTGA
GCATGATCATGCAGCAGGGCCTATCAAGTTCCAGTCCAGAAGCACCTGAGCCCTTTACCTTCAGCAACAC
CAAGCCCTTGTCACATTTTGTTTCTGAGCCAAGCCCCCAGAAGATGGCCTCCATGTCTACCCACTCCAGG
CAGTCATCTTTGCTCCACTACCTGCCTCAGGCAACACCAGCACATGCTCCTTCTGCCACTGCCTCCTCCA
CTGCCACTGCCACTTTGCAACTCCAGCATCATCATCAACAGCATCATCATCAACAGCATCATCATCAACA
GCAGCATCATCAACAACAGCATCATCAACAGCATCATCATCAACAGCAGCAGCATCAACAGCAGCAGCAT
CAACAACAACAGCAGCAGCAACCTGATCAGTCTTCATTCCTTCTGCAGCAGATAATGCAGCAACCCCAGC
GCTTTCAGCGCATGATGGCTTCTGATTCTATGCCTGCTCTGCCTGGACAGACTCATGTAGACAAAGCCTG
CAAGCTTGGGGAAGCCAGGCCTCCCCATGTCAGCCTGGGGCGACAGCCCCCATCCCGCCAGGCCCTGGGG
AGTGAGTCCTTCCTGCCCGGCAGCTCCTTTGCTCATGAGCTGGCCCGAGTCACATCCACCTCCTCGTACA
ACACCTCAGAGGCAGCCCCCTGGGGCGGCTGGGATCCGAAGGCCTGGAGGCAGGTGCCTGCTCCACTACT
GCCTAGCTGCGATGCTGCAGCCAGAGAAGCAGAGATCAGGTCCTATGGCAATGACCCCTAA

Translation (766 aa):
MDDWKSRLVIENMLPHFNMVGNRQETRKLQESGTSKRRQEGENFHFTGMADGSYPNKIKRPCLEDVTLSM
GPGAHPTSLSTEMQMPTLNMNPTSADLGVAGQSLLLENNPLDSNVVNSSAMGSPFGVPSTADTGLKGHAV
PYYEKNNSMPAVDQELQDLLEELTKIQEPSSNDLDLEKILGSKPEEPLVLHNPQAPLGPPAKLPVQMPHM
ESLGSSKEFASSCSQVAGTSLPIMPSSTGMSYSIPSSSKQIVSSSSSTAQAQVKNQVQNMLPVTMPPLSV
PQWHHAHQLKALAASKQGSATKQGSNRNWSSLPPPGLSPPYLPVPSPHPPPPQPPPPPFSPQNFTASCMS
SSSLSGSAVQSSPNALLSSMAPSSNASLGPTLPYVPAKLPGLPLNQQPQFSPQSSILANLVSSSVKSPQG
HLISALPTSTPGPSPPYRPENLSSPGLPQQSFTPQYSLIRSLTPTSNLLSQQQQQQQQQQQQQQQQQQQQ
QQQQHQANSIFKPMTSSQQPKTLSMIMQQGLSSSSPEAPEPFTFSNTKPLSHFVSEPSPQKMASMSTHSR
QSSLLHYLPQATPAHAPSATASSTATATLQLQHHHQQHHHQQHHHQQQHHQQQHHQQHHHQQQQHQQQQH
QQQQQQQPDQSSFLLQQIMQQPQRFQRMMASDSMPALPGQTHVDKACKLGEARPPHVSLGRQPPSRQALG
SESFLPGSSFAHELARVTSTSSYNTSEAAPWGGWDPKAWRQVPAPLLPSCDAAAREAEIRSYGNDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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