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Report for CCDS31141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31141.1 Public Homo sapiens 10 ITIH2 24 110 108 CCDS HistoryNCBI Gene:3698Re-query CCDS DB by CCDS ID:31141.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358415.9 ENSP00000351190.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358415.9Link to Ensembl Protein Viewer:ENSP00000351190.4Re-query CCDS DB by Nucleotide ID:ENST00000358415Re-query CCDS DB by Protein ID:ENSP00000351190
Original member Current member NCBI NM_002216.3 NP_002207.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002216.3Link to Protein Sequence:NP_002207.2Re-query CCDS DB by Nucleotide ID:NM_002216Re-query CCDS DB by Protein ID:NP_002207Link to BLAST:NP_002207.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002207.2 946 P19823 946 100% 0 0

Chromosomal Locations for CCDS 31141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 7703435 7703518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7705108 7705182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7707201 7707233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7709022 7709191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7713181 7713285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7717626 7717788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7720856 7720963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7721649 7721777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7723451 7723567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7726950 7727118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7727703 7727828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7729952 7730133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7731811 7731996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7732338 7732477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7734922 7735091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7738621 7738758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7743146 7743259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7744082 7744280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7744791 7744963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7746593 7746704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7749187 7749334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2841 nt):
ATGAAAAGACTCACGTGCTTTTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAATCCCCATAA
ATGGACTTTCTGAATTTGTAGACTATGAAGATCTTGTGGAACTGGCCCCAGGCAAATTTCAATTGGTGGC
AGAGAACCGGAGATATCAGAGAAGCCTTCCAGGAGAATCGGAAGAAATGATGGAAGAGGTTGATCAAGTA
ACTCTTTATAGCTATAAAGTCCAGTCTACTATTACTTCTCGGATGGCCACCACCATGATCCAGAGCAAAG
TGGTGAACAATTCCCCGCAGCCTCAGAATGTCGTGTTTGATGTTCAGATCCCCAAAGGAGCATTCATTTC
CAACTTCTCCATGACTGTGGACGGCAAGACATTTAGGAGCTCTATTAAGGAGAAAACTGTGGGCCGAGCT
CTTTATGCACAGGCCAGAGCAAAAGGCAAGACGGCTGGCTTGGTGAGGAGCAGCGCTCTTGATATGGAAA
ACTTCAGAACGGAAGTAAATGTCCTCCCAGGAGCAAAGGTGCAGTTCGAACTTCACTACCAGGAGGTGAA
GTGGAGGAAGCTGGGCTCCTATGAGCACAGGATCTATCTGCAACCTGGACGGCTGGCCAAACACTTAGAG
GTAGATGTGTGGGTTATCGAACCACAGGGACTGAGATTTCTTCATGTTCCCGACACATTTGAAGGCCATT
TCGATGGTGTTCCGGTCATTTCTAAAGGACAACAGAAGGCGCACGTCTCCTTCAAGCCCACGGTAGCACA
GCAGAGAATATGCCCTAACTGCCGGGAGACTGCGGTAGATGGGGAACTGGTGGTGCTGTATGACGTGAAA
AGAGAAGAGAAGGCTGGTGAACTGGAGGTGTTTAATGGATATTTTGTCCACTTCTTTGCTCCTGACAACC
TGGACCCAATTCCCAAAAACATCCTCTTTGTCATCGATGTGAGTGGCTCCATGTGGGGAGTTAAAATGAA
ACAAACTGTGGAAGCAATGAAGACCATATTGGATGACCTCAGAGCAGAAGACCATTTCTCTGTGATTGAT
TTCAACCAGAACATTCGAACTTGGAGAAATGATTTAATTTCAGCTACAAAAACACAGGTTGCAGATGCCA
AGAGGTATATTGAGAAAATCCAGCCCAGTGGAGGCACAAACATCAACGAAGCACTCCTACGGGCAATCTT
CATTTTGAATGAAGCCAATAACTTGGGACTGTTAGACCCCAACTCCGTCTCGCTGATCATTTTGGTTTCT
GATGGAGATCCAACAGTGGGCGAACTAAAACTGTCAAAAATTCAGAAAAACGTTAAGGAGAACATCCAAG
ACAATATCTCCTTGTTCAGTTTGGGCATGGGATTTGATGTGGACTATGATTTTTTGAAGAGACTGTCCAA
TGAAAACCATGGAATTGCACAAAGGATTTATGGAAACCAGGACACGTCTTCCCAGCTTAAGAAATTCTAC
AACCAGGTCTCCACTCCATTGCTCCGGAATGTTCAGTTCAACTATCCCCATACATCAGTCACGGACGTCA
CTCAAAACAATTTCCATAACTACTTTGGAGGCTCAGAGATTGTGGTGGCAGGAAAATTTGACCCTGCTAA
ATTGGATCAAATAGAGAGCGTTATCACGGCGACTTCGGCTAACACGCAGTTAGTCTTGGAGACCCTGGCC
CAGATGGACGACTTGCAGGATTTTCTATCGAAAGACAAGCATGCAGATCCCGATTTCACCAGGAAACTGT
GGGCCTATCTAACCATCAACCAACTGCTAGCTGAACGAAGCCTGGCTCCTACAGCTGCCGCCAAGAGAAG
AATTACAAGATCGATCCTGCAGATGTCTCTAGACCACCACATTGTGACTCCGCTGACCTCGCTGGTGATC
GAGAACGAGGCTGGGGATGAGCGCATGCTGGCGGATGCCCCACCGCAGGATCCCTCCTGCTGCTCAGGGG
CCCTGTATTACGGCAGCAAAGTGGTTCCAGATTCCACCCCGTCTTGGGCCAATCCTTCACCAACGCCCGT
GATCTCCATGCTGGCACAAGGATCTCAGGTGCTAGAGTCCACGCCACCCCCACATGTGATGAGAGTTGAA
AATGACCCACATTTCATCATTTATCTACCAAAAAGCCAAAAGAACATTTGTTTCAATATTGACTCAGAAC
CTGGAAAAATCCTCAACCTGGTTTCTGACCCAGAATCAGGAATTGTAGTCAACGGTCAGCTTGTTGGTGC
CAAGAAGCCCAACAATGGAAAACTAAGCACCTATTTTGGAAAACTGGGATTTTATTTCCAAAGTGAAGAC
ATAAAAATAGAAATCAGCACTGAGACCATCACCCTGAGCCATGGTTCTAGCACATTCTCCTTGTCCTGGT
CCGACACGGCTCAAGTCACGAATCAGAGGGTGCAGATCTCAGTGAAGAAAGAAAAAGTGGTAACTATCAC
CCTGGATAAAGAGATGTCCTTTTCTGTTTTACTTCATCGTGTTTGGAAGAAGCATCCCGTCAATGTTGAC
TTTCTGGGAATCTACATACCCCCTACAAACAAGTTCTCACCTAAAGCCCACGGACTAATAGGCCAGTTCA
TGCAGGAACCAAAGATACACATCTTCAATGAGAGACCAGGAAAGGACCCTGAGAAGCCAGAGGCCAGCAT
GGAAGTGAAGGGGCAGAAGCTGATCATCACCAGGGGCTTACAGAAAGACTACAGAACGGATCTAGTGTTT
GGAACGGACGTTACCTGCTGGTTTGTGCACAACAGTGGAAAAGGATTCATTGACGGGCATTACAAGGATT
ACTTCGTGCCTCAGCTCTACAGCTTTCTCAAACGGCCTTAA

Translation (946 aa):
MKRLTCFFICFFLSEVSGFEIPINGLSEFVDYEDLVELAPGKFQLVAENRRYQRSLPGESEEMMEEVDQV
TLYSYKVQSTITSRMATTMIQSKVVNNSPQPQNVVFDVQIPKGAFISNFSMTVDGKTFRSSIKEKTVGRA
LYAQARAKGKTAGLVRSSALDMENFRTEVNVLPGAKVQFELHYQEVKWRKLGSYEHRIYLQPGRLAKHLE
VDVWVIEPQGLRFLHVPDTFEGHFDGVPVISKGQQKAHVSFKPTVAQQRICPNCRETAVDGELVVLYDVK
REEKAGELEVFNGYFVHFFAPDNLDPIPKNILFVIDVSGSMWGVKMKQTVEAMKTILDDLRAEDHFSVID
FNQNIRTWRNDLISATKTQVADAKRYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPNSVSLIILVS
DGDPTVGELKLSKIQKNVKENIQDNISLFSLGMGFDVDYDFLKRLSNENHGIAQRIYGNQDTSSQLKKFY
NQVSTPLLRNVQFNYPHTSVTDVTQNNFHNYFGGSEIVVAGKFDPAKLDQIESVITATSANTQLVLETLA
QMDDLQDFLSKDKHADPDFTRKLWAYLTINQLLAERSLAPTAAAKRRITRSILQMSLDHHIVTPLTSLVI
ENEAGDERMLADAPPQDPSCCSGALYYGSKVVPDSTPSWANPSPTPVISMLAQGSQVLESTPPPHVMRVE
NDPHFIIYLPKSQKNICFNIDSEPGKILNLVSDPESGIVVNGQLVGAKKPNNGKLSTYFGKLGFYFQSED
IKIEISTETITLSHGSSTFSLSWSDTAQVTNQRVQISVKKEKVVTITLDKEMSFSVLLHRVWKKHPVNVD
FLGIYIPPTNKFSPKAHGLIGQFMQEPKIHIFNERPGKDPEKPEASMEVKGQKLIITRGLQKDYRTDLVF
GTDVTCWFVHNSGKGFIDGHYKDYFVPQLYSFLKRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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