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Report for CCDS7460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7460.1 Public Homo sapiens 10 ZDHHC16 24 110 108 CCDS HistoryNCBI Gene:84287Re-query CCDS DB by CCDS ID:7460.1Re-query CCDS DB by GeneID:84287See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370854.7 ENSP00000359891.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370854.7Link to Ensembl Protein Viewer:ENSP00000359891.3Re-query CCDS DB by Nucleotide ID:ENST00000370854Re-query CCDS DB by Protein ID:ENSP00000359891
Original member Current member EBI ENST00000393760.6 ENSP00000377357.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393760.6Link to Ensembl Protein Viewer:ENSP00000377357.1Re-query CCDS DB by Nucleotide ID:ENST00000393760Re-query CCDS DB by Protein ID:ENSP00000377357
Original member Current member NCBI NM_032327.4 NP_115703.2 Accepted alive Link to Nucleotide Sequence:NM_032327.4Link to Protein Sequence:NP_115703.2Re-query CCDS DB by Nucleotide ID:NM_032327Re-query CCDS DB by Protein ID:NP_115703Link to BLAST:NP_115703.2
Original member Current member NCBI NM_198046.3 NP_932163.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198046.3Link to Protein Sequence:NP_932163.1Re-query CCDS DB by Nucleotide ID:NM_198046Re-query CCDS DB by Protein ID:NP_932163Link to BLAST:NP_932163.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115703.2 377 Q969W1-1 377 100% 0 0
NP_932163.1 377 Q969W1-1 377 100% 0 0

Chromosomal Locations for CCDS 7460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97451676 97451918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97452090 97452284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97452415 97452503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97452895 97452923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97453530 97453663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97453799 97453846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97454714 97454799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97455660 97455783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97455974 97456044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97456777 97456891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGCGAGGCCAGCGGAGCCTGCTGCTGGGCCCGGCCCGCCTCTGCCTCCGCCTCCTTCTGCTGCTGGGTT
ACAGGCGCCGCTGTCCACCTCTACTCCGGGGTCTAGTACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCG
CTCCCTGCTCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTGATGCTGCCTTTGAGCCTGTCTACTGG
CTGGTAGACAACGTGATCCGCTGGTTTGGAGTGGTGTTCGTGGTCCTGGTGATCGTGCTGACAGGCTCCA
TTGTAGCTATCGCCTACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACTCAGTGCCACGACTCTGCTG
GCATTTCTTCTATAGCCACTGGAATCTGATCCTGATTGTCTTCCACTACTACCAGGCCATCACCACTCCG
CCTGGGTACCCACCCCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCA
AGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAAGATGGATCACCACTGCCCCTG
GCTAAACAATTGTGTGGGCCACTATAACCATCGGTACTTCTTCTCTTTCTGCTTTTTCATGACTCTGGGC
TGTGTCTACTGCAGCTATGGAAGTTGGGACCTTTTCCGGGAGGCTTATGCTGCCATTGAGAAAATGAAAC
AGCTCGACAAGAACAAACTACAGGCGGTTGCCAACCAGACTTATCACCAGACCCCACCACCCACCTTCTC
CTTTCGAGAAAGGATGACTCACAAGAGTCTTGTCTACCTCTGGTTCCTGTGCAGTTCTGTGGCACTTGCC
CTGGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCA
ACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAGGAATCCTTACAACTACGGCTGCTT
GGACAACTGGAAGGTATTCCTGGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGTGCTCTTACCTTCT
AGTCACTTGCCCCATGGGAATGGAATGAGCTGGGAGCCCCCTCCCTGGGTGACTGCTCACTCAGCCTCTG
TGATGGCAGTGTGA

Translation (377 aa):
MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTAVDAAFEPVYW
LVDNVIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFFYSHWNLILIVFHYYQAITTP
PGYPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLG
CVYCSYGSWDLFREAYAAIEKMKQLDKNKLQAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALA
LGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPS
SHLPHGNGMSWEPPPWVTAHSASVMAV


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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