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Report for CCDS28830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28830.1 Public Mus musculus 17 Dnph1 23 108 98 CCDS HistoryNCBI Gene:381101Re-query CCDS DB by CCDS ID:28830.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 28830.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046497.7 ENSMUSP00000045283.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046497.7Link to Ensembl Protein Viewer:ENSMUSP00000045283.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000046497Re-query CCDS DB by Protein ID:ENSMUSP00000045283
Original member Current member NCBI NM_207161.3 NP_997044.2 Accepted alive Link to Nucleotide Sequence:NM_207161.3Link to Protein Sequence:NP_997044.2Re-query CCDS DB by Nucleotide ID:NM_207161Re-query CCDS DB by Protein ID:NP_997044Link to BLAST:NP_997044.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997044.2 173 Q80VJ3 173 100% 0 0

Chromosomal Locations for CCDS 28830.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46496810 46496972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46498425 46498493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46498643 46498753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46498877 46499055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGGCGGCATCCGGGGAGCTGGTTCCATGCTCTGTGTACTTCTGCGGGAGCATCCGCGGCGGGCGGGAAG
ACCAAGCTCTGTATTCGCGGATCGTATCCCGGCTGCGGCGCTATGGGAAGGTGCTCACTGAGCACGTGGC
TGATGCTGAGTTGGAGCCGCGTGGGGAAGAGGCTGCTGGGGGCGACCAGTTCATCCATGAGCGGGACCTG
GCCTGGCTCCGGCAGGCCGATGTGGTCGTGGCAGAAGTGACACAGCCATCCCTGGGTGTTGGCTACGAAT
TGGGCCGGGCAGTAGCTCTTGGTAAGCCGATCCTGTGCCTGTTCCGACCACAGTCTGGCCGAGTGCTTTC
CGCCATGATCCGGGGAGCAGCCGATGGCTCGAGGTTCCAGGTGTGGGACTACGCAGAGGAAGAAGTGGAG
ACCATGCTCCATCGGTACTTTGAGGCTTATCTTCCTCAGGGGACGGCTTCCTCCAGTAACCCAAGTGCCT
GTCTTAACCCTACTGTATTAGAAAAAATTTAA

Translation (173 aa):
MAASGELVPCSVYFCGSIRGGREDQALYSRIVSRLRRYGKVLTEHVADAELEPRGEEAAGGDQFIHERDL
AWLRQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEEEVE
TMLHRYFEAYLPQGTASSSNPSACLNPTVLEKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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