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Report for CCDS52585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52585.1 Public Mus musculus 8 Ano8 23 108 98 CCDS HistoryNCBI Gene:382014Re-query CCDS DB by CCDS ID:52585.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52585.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093450.5 ENSMUSP00000091157.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093450.5Link to Ensembl Protein Viewer:ENSMUSP00000091157.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000093450Re-query CCDS DB by Protein ID:ENSMUSP00000091157
Original member Current member NCBI NM_001164679.1 NP_001158151.1 Accepted alive Link to Nucleotide Sequence:NM_001164679.1Link to Protein Sequence:NP_001158151.1Re-query CCDS DB by Nucleotide ID:NM_001164679Re-query CCDS DB by Protein ID:NP_001158151Link to BLAST:NP_001158151.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158151.1 1060 Q6PB70 1060 100% 0 0

Chromosomal Locations for CCDS 52585.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 71476385 71476921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71478721 71478831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71478927 71479058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71479151 71479342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71480436 71481242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71481952 71482026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71482133 71482188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71482284 71482410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71482507 71482659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71482980 71483141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71483240 71483367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71483448 71483564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71484268 71484364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71484434 71484572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71484749 71484881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71485000 71485110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71485754 71485859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3183 nt):
ATGGCCGAGGCGGCTTCGGGCGCCGGGGACGTGACCCTGGAGGGGGAGCGGGGCAAGAGGCCCCCTCCCG
AGGGCGAGCCTGCGGCGCCTGCGTCTGGAGTACTGGATAAACTATTTGGGAAGAGGCTCCTGCAGGCTGG
CCGCTACCTGGTGTCCCACAAGGCATGGATGAAGACAGTGCCCACTGAGGACTGCGACGTGCTCATGACC
TTCCCAGACACCACTGATGACCACACGCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCATTCCCGAGC
TGATCGTGCAAGTTCGCCACCACCGCCACACGCGTGCCTATGCCTTCTTTGTCACCGCCACATACGAGAG
CCTGCTCCGTGGGGCCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCGAATTTGGAGGGGGCACCCGC
AGCTTCTCCTGCGAAGAGGACTTCATCTACGAGAATGTGGAGAGCGAGCTACGCTTCTTCACATCGCAGG
AGCGGCAGAGCATCATTCGCTTCTGGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGT
GCGCTTCTTGGAGGACCAGCCAATCATTCCGGAGCTGGCTGCACGAGGCATCATACAGCAGGTGTTTCCA
GTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGCAGGCCGTGTGTGAAAACCAGCCTT
TAGATGATATCTGTGACTATTTTGGGGTGAAGATTGCCATGTATTTTGCCTGGCTGGGCTTCTACACATC
GGCAATGGTTTATCCTGCAGTTTTTGGCTCTGTTCTGTATACATTCACTGAGGCTGATCAGACAAGCCGG
GATGTTTCCTGTGTGGTCTTCGCTCTCTTCAATGTGATCTGGTCAACACTGTTCTTGGAGGAGTGGAAAC
GGAGGGGGGCAGAGCTAGCCTACAAGTGGGGTACACTAGACTCACCTGGGGAGGCTGTGGAGGAGCCACG
TCCCCAGTTCAGGGGCATCCGGCGCATCAGCCCCATCACCCGGGCTGAGGAGTTCTACTACCCACCCTGG
AAGCGATTGCTTTTCCAACTACTTGTCAGCCTGCCTCTGTGCCTGGCCTGTCTTATCTGTGTCTTTATAC
TGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGTCTTGAGTGTGAAGGGTCTGCCCCGCCTGGTTCGCTT
CTTGCCCAAGGTTATGCTAGCCCTGCTGGTCAGCGTGAGTGCTGAGGGCTACAAGAAGTTAGCTGTGTGG
CTAAATGACATGGAGAATTACCGGCTAGAGAGCACCTACGAGAGGCACCTTATCATCAAAGTCGTCTTGT
TCCAGTTTGTCAACTCGTACTTGAGTCTGTTCTACATCGGCTTCTACCTCAAAGACATGGACCGCCTAAA
AGAGATGCTGGCCACCCTACTCATCACCCGGCAGCTGCTGCAGAACGTGCGCGAGGTGCTGCAGCCGCAC
CTGTACCGCAGGCTGGGCAGCGGGGAGCTGGGCTTGCGAACCATCCTGGAGCTGGCCCGGGCCCTGCTAG
GCCTGCTGAACCCCTTGCGCCCGGATCCCCGACGGCACTTGGAGGCCCAGGCTGATGAGGGCGGAGCTGG
GAGCCGCAGGTGCCTGGGCGGTGGCTGCGGGGCGCCAGAGGAGGAGAATGAGGAGGAGGAGGAGGCAGCT
GTGGAGCGGAGGCCAGCAGGGGAAGGAGGGGAGGTTCCAGAAGGGCCTCGGGGTGGCAAGGAGGAGGACG
AGGAGGAGGACGACGACGAAGACGAGGACGAGGAATACGAGGGCGAGGAAGGAAGCCTCCTAGACTGCGG
GCTGCGCCTCAAGAAGGTCAGCTTTGCTGAGCGGGGCGCAGGGCGGCGCAGGCCAGGCCCCAGCCCAGAC
GGCCTCTTGGAGGAGGGGAGCCCTACCATGGTGGAGAAGGGGCTGGAGCCTGGTGTGTTTACTCTGGCCG
AAGAAGACGATGAGCCTGAGGGGCCTCCAGGCAGTCCCGGGCCAGAGCCCCAGACTGTCTTGCTTCGTCG
GGCGAGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGACCGAGATACGGAGACTGGCTCTGGCGACGCG
GCTGGAAGACAGAAAAGACATAACAGGTCCTCGTGGATCGACCCGCCAGAGGAGGAGCATTCACCGCAGC
TCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAAGTATGAGGACACCTTCCAGGACTACCAGGAGATGTT
CGTGCAGTTTGGCTATGTAGTGCTCTTCTCCTCTGCCTTCCCACTGGCCGCCCTGTGCGCCCTCGTCAAC
AACCTGATTGAGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCGGCGTG
TGGAGAGCATTGGCCAGTGGCAGAAGGTCATGGAGGCGATGGGTGTGCTGGCCATCGTGGTAAACTGCTA
CCTCATTGGCCAGTGTGGCCAGCTGCAGCGCCTGTTCCCCTGGCTGAGCCCAGAGGCGGCCATTGTATCT
GTGGTGGTGCTAGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGACATCCCCG
GCTGGGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCACGAGCGGCA
GGCGCAGCAGCGCTTTCAGCAGCAGCAGCGGCGGCGGCGCGAGGAGGAGGAGCGGCAGCGGCACGCGGAG
CAGCAGGCGCGGCGGGAGCGCGACACGGGAGGCCGCGAGGAGGCGCGCGCGGAGGCGCCGGGTCCTGACC
CCGTGGCGGAGCGGGGCGCTGCCAAGGCCAAGGGCAGCGAGCGGCCCCGACGGCCCGGAGCGCTGCTGCC
ACCCGGACCTGTGCTGCGGCTGAAGCAGATCATCCCGTTGCAGACTCGGCCGCCCGCGCCCACCGGGTGC
GCGCCCCCGCCGCGCTCGCCCGCGGACACGCGCCTGCCCGCCTTCCTCAGCCTGCGCTTCCTCAAGGCTC
CGGAGCGAGGCCCGTCCCCGCCGCGGCCCGGGAAGCTGTTCGCATTCTCGGCGCGCGAGCCCTCAGCCAA
CGGGGCCCCCGGGGGCGGCGCGCGCGCTCACAGGAGCGCCGGGGACGAGCCCGCGGCCGCCGAGCCCGAA
CCGCGGCCGGAGGACGCAGGTCACAGGCCTTAA

Translation (1060 aa):
MAEAASGAGDVTLEGERGKRPPPEGEPAAPASGVLDKLFGKRLLQAGRYLVSHKAWMKTVPTEDCDVLMT
FPDTTDDHTLLWLLNHIRVGIPELIVQVRHHRHTRAYAFFVTATYESLLRGADELGLRKAVKAEFGGGTR
SFSCEEDFIYENVESELRFFTSQERQSIIRFWLQNLRAKQGEALHNVRFLEDQPIIPELAARGIIQQVFP
VHEQRILNRLMKSWVQAVCENQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSVLYTFTEADQTSR
DVSCVVFALFNVIWSTLFLEEWKRRGAELAYKWGTLDSPGEAVEEPRPQFRGIRRISPITRAEEFYYPPW
KRLLFQLLVSLPLCLACLICVFILMLGCFQLQELVLSVKGLPRLVRFLPKVMLALLVSVSAEGYKKLAVW
LNDMENYRLESTYERHLIIKVVLFQFVNSYLSLFYIGFYLKDMDRLKEMLATLLITRQLLQNVREVLQPH
LYRRLGSGELGLRTILELARALLGLLNPLRPDPRRHLEAQADEGGAGSRRCLGGGCGAPEEENEEEEEAA
VERRPAGEGGEVPEGPRGGKEEDEEEDDDEDEDEEYEGEEGSLLDCGLRLKKVSFAERGAGRRRPGPSPD
GLLEEGSPTMVEKGLEPGVFTLAEEDDEPEGPPGSPGPEPQTVLLRRARGEGRDQGPDGDRDTETGSGDA
AGRQKRHNRSSWIDPPEEEHSPQLTQAELESCMKKYEDTFQDYQEMFVQFGYVVLFSSAFPLAALCALVN
NLIEIRSDAFKLCTGLQRPFGRRVESIGQWQKVMEAMGVLAIVVNCYLIGQCGQLQRLFPWLSPEAAIVS
VVVLEHLALLVKYLIHVAIPDIPGWVAEEMAKLEYQRREAFKRHERQAQQRFQQQQRRRREEEERQRHAE
QQARRERDTGGREEARAEAPGPDPVAERGAAKAKGSERPRRPGALLPPGPVLRLKQIIPLQTRPPAPTGC
APPPRSPADTRLPAFLSLRFLKAPERGPSPPRPGKLFAFSAREPSANGAPGGGARAHRSAGDEPAAAEPE
PRPEDAGHRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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